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Koolen PGL, Li Z, Roussakis E, Paul MA, Ibrahim AMS, Matyal R, Huang T, Evans CL, Lin SJ

Oxygen-Sensing Paint-On Bandage: Calibration of a Novel Approach in Tissue Perfusion Assessment.
Plast Reconstr Surg. 2017;140(1):89-96 - PMID: 28654595 - DOI: 10.1097/PRS.0000000000003421

Roussakis E, Cascales JP, Yoeli D, Cralley A, Goss A, Wiatrowski A, Carvalho M, Moore HB, Moore EE, Huang CA, Evans CL

Versatile, in-line optical oxygen tension sensors for continuous monitoring during ex vivo kidney perfusion.
Sens Diagn. 2024;3(6):1014-1019 - PMID: 38882471 - PMCID: PMC11170683 - DOI: 10.1039/d3sd00240c

Framme C, Alt C, Schnell S, Sherwood M, Brinkmann R, Lin CP

Selective targeting of the retinal pigment epithelium in rabbit eyes with a scanning laser beam.
Invest Ophthalmol Vis Sci. 2007;48(4):1782-92 - PMID: 17389512 - DOI: 10.1167/iovs.06-0797

Wei X, Runnels JM, Lin CP

Selective uptake of indocyanine green by reticulocytes in circulation.
Invest Ophthalmol Vis Sci. 2003;44(10):4489-96 - PMID: 14507897 - PMCID: PMC2830078 - DOI: 10.1167/iovs.03-0041

Alt C, Runnels JM, Mortensen LJ, Zaher W, Lin CP

In vivo imaging of microglia turnover in the mouse retina after ionizing radiation and dexamethasone treatment.
Invest Ophthalmol Vis Sci. 2014;55(8):5314-9 - PMID: 25082884 - DOI: 10.1167/iovs.14-14254

Runnels JM, Zamiri P, Spencer JA, Veilleux I, Wei X, Bogdanov A, Lin CP

Imaging molecular expression on vascular endothelial cells by in vivo immunofluorescence microscopy.
Mol Imaging. 2006;5(1):31-40 - PMID: 16779968 - PMCID: PMC2801601

Wei X, Sipkins DA, Pitsillides CM, Novak J, Georgakoudi I, Lin CP

Real-time detection of circulating apoptotic cells by in vivo flow cytometry.
Mol Imaging. 2005;4(4):415-6 - PMID: 16285902 - PMCID: PMC2801924 - DOI: 10.2310/7290.2005.05148

Ayers BC, Aguirre AD, Sundt TM, Lu MT, Jassar A

An open-source, automated machine learning approach for large-scale image retrieval for thoracic aorta analysis studies.
JAMIA Open. 2025;8(4):ooaf066 - PMID: 40662082 - PMCID: PMC12257624 - DOI: 10.1093/jamiaopen/ooaf066

Alt C, Veilleux I, Lee H, Pitsillides CM, Côté D, Lin CP

Retinal flow cytometer.
Opt Lett. 2007;32(23):3450-2 - PMID: 18059963 - PMCID: PMC2794483 - DOI: 10.1364/ol.32.003450

Nam AS, Braaf B, Vakoc BJ

Using the dynamic forward scattering signal for optical coherence tomography based blood flow quantification.
Opt Lett. 2022;47(12):3083-3086 - PMID: 35709056 - PMCID: PMC9580005 - DOI: 10.1364/OL.455475

Lippok N, Vakoc BJ

RF properties of circular-ranging OCT signals.
Opt Lett. 2022;47(7):1903-1906 - PMID: 35363765 - PMCID: PMC9027934 - DOI: 10.1364/OL.450318

Harper DJ, Vakoc BJ

Relationship between axial resolution and signal-to-noise ratio in optical coherence tomography.
Opt Lett. 2022;47(6):1517-1520 - PMID: 35290353 - PMCID: PMC8958905 - DOI: 10.1364/OL.449421

Ruiz-Lopera S, Restrepo R, Cannon TM, Villiger M, Bouma BE, Uribe-Patarroyo N

Computational refocusing in phase-unstable polarization-sensitive optical coherence tomography.
Opt Lett. 2023;48(18):4765-4768 - PMID: 37707897 - PMCID: PMC10871002 - DOI: 10.1364/OL.499051

Potma EO, Evans C, Xie XS, Jones RJ, Ye J

Picosecond-pulse amplification with an external passive optical cavity.
Opt Lett. 2003;28(19):1835-7 - PMID: 14514117 - DOI: 10.1364/ol.28.001835

Evans CL, Potma EO, Xie XS

Coherent anti-stokes raman scattering spectral interferometry: determination of the real and imaginary components of nonlinear susceptibility chi(3) for vibrational microscopy.
Opt Lett. 2004;29(24):2923-5 - PMID: 15645825 - DOI: 10.1364/ol.29.002923

Potma EO, Evans CL, Xie XS

Heterodyne coherent anti-Stokes Raman scattering (CARS) imaging.
Opt Lett. 2006;31(2):241-3 - PMID: 16441043 - DOI: 10.1364/ol.31.000241

Ganikhanov F, Evans CL, Saar BG, Xie XS

High-sensitivity vibrational imaging with frequency modulation coherent anti-Stokes Raman scattering (FM CARS) microscopy.
Opt Lett. 2006;31(12):1872-4 - PMID: 16729099 - DOI: 10.1364/ol.31.001872

Aguirre AD, Hsiung P, Ko TH, Hartl I, Fujimoto JG

High-resolution optical coherence microscopy for high-speed, in vivo cellular imaging.
Opt Lett. 2003;28(21):2064-6 - PMID: 14587816 - DOI: 10.1364/ol.28.002064

Chen Y, Huang SW, Aguirre AD, Fujimoto JG

High-resolution line-scanning optical coherence microscopy.
Opt Lett. 2007;32(14):1971-3 - PMID: 17632613 - DOI: 10.1364/ol.32.001971

Swanson EA, Izatt JA, Hee MR, Huang D, Lin CP, Schuman JS, Puliafito CA, Fujimoto JG

In vivo retinal imaging by optical coherence tomography.
Opt Lett. 1993;18(21):1864-6 - PMID: 19829430 - DOI: 10.1364/ol.18.001864

Schulz-Hildebrandt H, Gardecki JA, Miller T, Avila-Wallace M, Villareyna-Lopez E, Tearney G

Phase-sensitive dynamic micro-optical coherence tomography for high-speed intracellular motion imaging.
Opt Lett. 2025;50(15):4734-4737 - PMID: 40751978 - DOI: 10.1364/OL.563024

Liu G, Ahn SW, Kang JW, Bhagavatula S, Matthew D, Martin S, Marlin C, So PTC, Tearney GJ, Jonas O

Two-site microendoscopic imaging probe for simultaneous three-dimensional imaging at two anatomic locations in tissues.
Opt Lett. 2024;49(12):3312-3315 - PMID: 38875608 - PMCID: PMC11298057 - DOI: 10.1364/OL.525945

Rao Chintada B, Keahey P, Uribe-Patarroyo N, Bouma BE, Villiger M

Sample tilting for speckle suppression through angular compounding.
Opt Lett. 2024;49(17):4979-4982 - PMID: 39208013 - PMCID: PMC11827440 - DOI: 10.1364/OL.533271

Masoumi S, Lee J, Jones GL, Quémener M, Parent M, Bouma BE, Hariri LP, Côté DC, Villiger M

Absolute depth-resolved optic axis measurement with catheter-based polarization sensitive optical coherence tomography.
Biomed Opt Express. 2024;15(12):6957-6976 - PMID: 39679397 - PMCID: PMC11640563 - DOI: 10.1364/BOE.538560

Pence IJ, Kuzma BA, Brinkmann M, Hellwig T, Evans CL

Multi-window sparse spectral sampling stimulated Raman scattering microscopy.
Biomed Opt Express. 2021;12(10):6095-6114 - PMID: 34745724 - PMCID: PMC8547998 - DOI: 10.1364/BOE.432177

Cascales JP, Roussakis E, Witthauer L, Goss A, Li X, Chen Y, Marks HL, Evans CL

Wearable device for remote monitoring of transcutaneous tissue oxygenation.
Biomed Opt Express. 2020;11(12):6989-7002 - PMID: 33408975 - PMCID: PMC7747925 - DOI: 10.1364/BOE.408850

Evans CL, Hermsmeier M, Yamamoto A, Chan KF

Visualizing topical drug uptake with conventional fluorescence microscopy and deep learning.
Biomed Opt Express. 2020;11(12):6864-6880 - PMID: 33408967 - PMCID: PMC7747892 - DOI: 10.1364/BOE.405502

Haft-Javaherian M, Villiger M, Otsuka K, Daemen J, Libby P, Golland P, Bouma BE

Segmentation of anatomical layers and imaging artifacts in intravascular polarization sensitive optical coherence tomography using attending physician and boundary cardinality losses.
Biomed Opt Express. 2024;15(3):1719-1738 - PMID: 38495711 - PMCID: PMC10942710 - DOI: 10.1364/BOE.514673

Brinkmann M, Fast A, Hellwig T, Pence I, Evans CL, Fallnich C

Portable all-fiber dual-output widely tunable light source for coherent Raman imaging.
Biomed Opt Express. 2019;10(9):4437-4449 - PMID: 31565500 - PMCID: PMC6757451 - DOI: 10.1364/BOE.10.004437

Osseiran S, Cruz JD, Jeong S, Wang H, Fthenakis C, Evans CL

Characterizing stratum corneum structure, barrier function, and chemical content of human skin with coherent Raman scattering imaging.
Biomed Opt Express. 2018;9(12):6425-6443 - PMID: 31065440 - PMCID: PMC6490993 - DOI: 10.1364/BOE.9.006425

Hermsmeier M, Jeong S, Yamamoto A, Chen X, Nagavarapu U, Evans CL, Chan KF

Characterization of human cutaneous tissue autofluorescence: implications in topical drug delivery studies with fluorescence microscopy.
Biomed Opt Express. 2018;9(11):5400-5418 - PMID: 30460136 - PMCID: PMC6238944 - DOI: 10.1364/BOE.9.005400

Jeong S, Hermsmeier M, Osseiran S, Yamamoto A, Nagavarapu U, Chan KF, Evans CL

Visualization of drug distribution of a topical minocycline gel in human facial skin.
Biomed Opt Express. 2018;9(7):3434-3448 - PMID: 29984108 - PMCID: PMC6033575 - DOI: 10.1364/BOE.9.003434

Bec J, Zhou X, Villiger M, Southard JA, Bouma B, Marcu L

Dual modality intravascular catheter system combining pulse-sampling fluorescence lifetime imaging and polarization-sensitive optical coherence tomography.
Biomed Opt Express. 2024;15(4):2114-2132 - PMID: 38633060 - PMCID: PMC11019710 - DOI: 10.1364/BOE.516515

Li Z, Navarro-Alvarez N, Keeley EJ, Nowell NH, Goncalves BMM, Huang CA, Evans CL

Non-invasive monitoring of skin inflammation using an oxygen-sensing paint-on bandage.
Biomed Opt Express. 2017;8(10):4640-4651 - PMID: 29082091 - PMCID: PMC5654806 - DOI: 10.1364/BOE.8.004640

Saytashev I, Glenn R, Murashova GA, Osseiran S, Spence D, Evans CL, Dantus M

Multiphoton excited hemoglobin fluorescence and third harmonic generation for non-invasive microscopy of stored blood.
Biomed Opt Express. 2016;7(9):3449-3460 - PMID: 27699111 - PMCID: PMC5030023 - DOI: 10.1364/BOE.7.003449

Jones GL, Albadawi H, Hariri LP, Bouma BE, Oklu R, Villiger M

Aging of deep venous thrombosis in-vivo using polarization sensitive optical coherence tomography.
Biomed Opt Express. 2024;15(6):3627-3638 - PMID: 38867781 - PMCID: PMC11166430 - DOI: 10.1364/BOE.522238

Li Z, Roussakis E, Koolen PG, Ibrahim AM, Kim K, Rose LF, Wu J, Nichols AJ, Baek Y, Birngruber R, Apiou-Sbirlea G, Matyal R, Huang T, Chan R, Lin SJ, Evans CL

Non-invasive transdermal two-dimensional mapping of cutaneous oxygenation with a rapid-drying liquid bandage.
Biomed Opt Express. 2014;5(11):3748-64 - PMID: 25426308 - PMCID: PMC4242015 - DOI: 10.1364/BOE.5.003748

Lee HC, Liu JJ, Sheikine Y, Aguirre AD, Connolly JL, Fujimoto JG

Ultrahigh speed spectral-domain optical coherence microscopy.
Biomed Opt Express. 2013;4(8):1236-54 - PMID: 24009989 - PMCID: PMC3756571 - DOI: 10.1364/BOE.4.001236

Chintada BR, Ruiz-Lopera S, Restrepo R, Bouma BE, Villiger M, Uribe-Patarroyo N

Probabilistic volumetric speckle suppression in OCT using deep learning.
Biomed Opt Express. 2024;15(8):4453-4469 - PMID: 39346991 - PMCID: PMC11427188 - DOI: 10.1364/BOE.523716

Mansutti G, Villiger M, Bouma BE, Uribe-Patarroyo N

Full-field amplitude speckle decorrelation angiography.
Biomed Opt Express. 2024;15(10):5756-5772 - PMID: 39421771 - PMCID: PMC11482163 - DOI: 10.1364/BOE.530993

Cannon TM, Bouma BE, Uribe-Patarroyo N

Mapping optical scattering properties to physical particle information in singly and multiply scattering samples.
Biomed Opt Express. 2023;14(8):4326-4348 - PMID: 37799686 - PMCID: PMC10549752 - DOI: 10.1364/BOE.494518

Jones GL, Xiong Q, Liu X, Bouma BE, Villiger M

Single-input polarization-sensitive optical coherence tomography through a catheter.
Biomed Opt Express. 2023;14(9):4609-4626 - PMID: 37791262 - PMCID: PMC10545192 - DOI: 10.1364/BOE.497123

Mortensen LJ, Alt C, Turcotte R, Masek M, Liu TM, Côté DC, Xu C, Intini G, Lin CP

Femtosecond laser bone ablation with a high repetition rate fiber laser source.
Biomed Opt Express. 2014;6(1):32-42 - PMID: 25657872 - PMCID: PMC4317121 - DOI: 10.1364/BOE.6.000032

Wang K, Liu TM, Wu J, Horton NG, Lin CP, Xu C

Three-color femtosecond source for simultaneous excitation of three fluorescent proteins in two-photon fluorescence microscopy.
Biomed Opt Express. 2012;3(9):1972-7 - PMID: 23024893 - PMCID: PMC3447541 - DOI: 10.1364/BOE.3.001972

Bernstein L, Ramier A, Wu J, Aiello VD, Béland MJ, Lin CP, Yun SH

Ultrahigh resolution spectral-domain optical coherence tomography using the 1000-1600 nm spectral band.
Biomed Opt Express. 2022;13(4):1939-1947 - PMID: 35519264 - PMCID: PMC9045918 - DOI: 10.1364/BOE.443654

Turcotte R, Alt C, Mortensen LJ, Lin CP

Characterization of multiphoton microscopy in the bone marrow following intravital laser osteotomy.
Biomed Opt Express. 2014;5(10):3578-88 - PMID: 25360374 - PMCID: PMC4206326 - DOI: 10.1364/BOE.5.003578

Photiou C, Thrapp A, Tearney G, Pitris C

Deep learning for the detection of colon polyps with malignant potential: ex vivo classification using feature-enhanced optical coherence tomography (OCT) images.
Biomed Opt Express. 2025;16(6):2543-2554 - PMID: 40677387 - PMCID: PMC12265449 - DOI: 10.1364/BOE.555185

Leitgeb RA, Bouma B, Grieve K, Hendon C, Podoleanu A, Wojtkowski M, Yasuno Y

30 Years of Optical Coherence Tomography: introduction to the feature issue.
Biomed Opt Express. 2023;14(10):5484-5487 - PMID: 37854547 - PMCID: PMC10581797 - DOI: 10.1364/BOE.505569

Hwang W, McPartland T, Raymond T, Han M, Jeong S, Evans CL

Quantitative investigation of photobleaching-based autofluorescence suppression in formalin-fixed paraffin-embedded human tissue.
Biomed Opt Express. 2025;16(2):553-565 - PMID: 39958863 - PMCID: PMC11828445 - DOI: 10.1364/BOE.547033

Turcotte R, Wu JW, Lin CP

Intravital multiphoton photoconversion with a cell membrane dye.
J Biophotonics. 2016;10(2):206-210 - PMID: 27433967 - DOI: 10.1002/jbio.201600077
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