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Lippok N, Vakoc BJ

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Nam AS, Braaf B, Vakoc BJ

Using the dynamic forward scattering signal for optical coherence tomography based blood flow quantification.
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Joo J, Kim TS, Vakoc BJ, Oh WY

Robust and easy-to-operate stretched-pulse mode-locked wavelength-swept laser with an all-polarization-maintaining fiber cavity for 10  MHz A-line rate optical coherence tomography.
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Salimi MH, Villiger M, Tabatabaei N

Transient-mode photothermal optical coherence tomography.
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Keahey PA, Bouma BE, Villiger M

Automated noise estimation in polarization-sensitive optical coherence tomography.
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Lee H, Kim GH, Villiger M, Jang H, Bouma BE, Kim CS

Linear-in-wavenumber actively-mode-locked wavelength-swept laser.
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Lippok N, Vakoc BJ

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Ruiz-Lopera S, Restrepo R, Cuartas-Velez C, Bouma BE, Uribe-Patarroyo N

Computational adaptive optics in phase-unstable optical coherence tomography.
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López-Marín A, Springeling G, Beurskens R, van Beusekom H, van der Steen AFW, Koch AD, Bouma BE, Huber R, van Soest G, Wang T

Motorized capsule for shadow-free OCT imaging and synchronous beam control.
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Cui D, Chu KK, Yin B, Ford TN, Hyun C, Leung HM, Gardecki JA, Solomon GM, Birket SE, Liu L, Rowe SM, Tearney GJ

Flexible, high-resolution micro-optical coherence tomography endobronchial probe toward in vivo imaging of cilia.
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Khazaeinezhad R, Siddiqui M, Vakoc BJ

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Liang CP, Dong J, Ford T, Reddy R, Hosseiny H, Farrokhi H, Beatty M, Singh K, Osman H, Vuong B, Baldwin G, Grant C, Giddings S, Gora MJ, Rosenberg M, Nishioka N, Tearney G

Optical coherence tomography-guided laser marking with tethered capsule endomicroscopy in unsedated patients.
Biomed Opt Express. 2019;10(3):1207-1222 - PMID: 30891340 - PMCID: PMC6420285 - DOI: 10.1364/BOE.10.001207

Liu Z, Mackay S, Gordon DM, Anderson JD, Haithcock DW, Garson CJ, Tearney GJ, Solomon GM, Pant K, Prabhakarpandian B, Rowe SM, Guimbellot JS

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Biomed Opt Express. 2019;10(10):5414-5430 - PMID: 31646055 - PMCID: PMC6788592 - DOI: 10.1364/BOE.10.005414

Lo WCY, Uribe-Patarroyo N, Hoebel K, Beaudette K, Villiger M, Nishioka NS, Vakoc BJ, Bouma BE

Balloon catheter-based radiofrequency ablation monitoring in porcine esophagus using optical coherence tomography.
Biomed Opt Express. 2019;10(4):2067-2089 - PMID: 31086717 - PMCID: PMC6484999 - DOI: 10.1364/BOE.10.002067

Walther J, Li Q, Villiger M, Farah CS, Koch E, Karnowski K, Sampson DD

Depth-resolved birefringence imaging of collagen fiber organization in the human oral mucosa in vivo.
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Xiong Q, Wang N, Liu X, Chen S, Braganza CS, Bouma BE, Liu L, Villiger M

Constrained polarization evolution simplifies depth-resolved retardation measurements with polarization-sensitive optical coherence tomography.
Biomed Opt Express. 2019;10(10):5207-5222 - PMID: 31646042 - PMCID: PMC6788597 - DOI: 10.1364/BOE.10.005207

Sankepalle DM, Langley A, Hasan T, Mallidi S

Custom-designed Verasonics-based multi-wavelength photoacoustic and ultrasound imaging: from technical advances to preclinical applications in cancer.
Biomed Opt Express. 2025;16(12):5279-5298 - PMID: 41394496 - PMCID: PMC12698091 - DOI: 10.1364/BOE.577766

Price LJ, Zhang K, Otero NJ, Repgen P, Valdes PA, Wise F, Ilday FÖ, Spring BQ

Sub-50-femtosecond gain-managed amplified pulses enhance nonlinear ablation efficiency.
Biomed Opt Express. 2025;17(1):202-216 - PMID: 41532132 - PMCID: PMC12795435 - DOI: 10.1364/BOE.582102

Luna SK, Kuzma BA, Lemberger NS, Wallmeier K, Fallnich C, Evans CL

Adaptive optics stimulated Raman scattering microscopy for topical product pharmacokinetic imaging.
Biomed Opt Express. 2025;17(1):125-144 - PMID: 41532102 - PMCID: PMC12795415 - DOI: 10.1364/BOE.576409

Ruiz-Lopera S, Veysset D, Bouma BE, Uribe-Patarroyo N

Wavenumber-space wavefront sensorless adaptive-optics for optical coherence tomography.
Biomed Opt Express. 2025;17(1):282-293 - PMID: 41532101 - PMCID: PMC12795413 - DOI: 10.1364/BOE.582534

Im J, Schulz-Hildebrandt H, Yue M, Kim J, Tearney GJ

Label-free subcellular imaging with dynamic spectrally encoded confocal microscopy (D-SECM) with subpixel jitter correction.
Biomed Opt Express. 2026;17(2):512-526 - PMID: 41693877 - PMCID: PMC12904563 - DOI: 10.1364/BOE.582249

Bagramyan A, Wu JW, Mirsanaye K, Alt C, Lin CP

Towards noninvasive white blood cell count.
Biomed Opt Express. 2025;16(5):1988-1998 - PMID: 41767933 - PMCID: PMC12945479 - DOI: 10.1364/BOE.555588

Bouma BE, Villiger M, Otsuka K, Oh WY

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Gora MJ, Suter MJ, Tearney GJ, Li X

Endoscopic optical coherence tomography: technologies and clinical applications [Invited].
Biomed Opt Express. 2017;8(5):2405-2444 - PMID: 28663882 - PMCID: PMC5480489 - DOI: 10.1364/BOE.8.002405

Hajjarian Z, Tshikudi DM, Nadkarni SK

Evaluating platelet aggregation dynamics from laser speckle fluctuations.
Biomed Opt Express. 2017;8(7):3502-3515 - PMID: 28717586 - PMCID: PMC5508847 - DOI: 10.1364/BOE.8.003502

Izatt JA, Boppart S, Bouma B, de Boer J, Drexler W, Li X, Yasuno Y

Introduction to the feature issue on the 25 year anniversary of optical coherence tomography.
Biomed Opt Express. 2017;8(7):3289-3291 - PMID: 28717567 - PMCID: PMC5508828 - DOI: 10.1364/BOE.8.003289

Liu X, Beaudette K, Wang X, Liu L, Bouma BE, Villiger M

Tissue-like phantoms for quantitative birefringence imaging.
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Wang J, Hosoda M, Tshikudi DM, Hajjarian Z, Nadkarni SK

Intraluminal laser speckle rheology using an omni-directional viewing catheter.
Biomed Opt Express. 2016;8(1):137-150 - PMID: 28101407 - PMCID: PMC5231287 - DOI: 10.1364/BOE.8.000137

Chu KK, Unglert C, Ford TN, Cui D, Carruth RW, Singh K, Liu L, Birket SE, Solomon GM, Rowe SM, Tearney GJ

In vivo imaging of airway cilia and mucus clearance with micro-optical coherence tomography.
Biomed Opt Express. 2016;7(7):2494-505 - PMID: 27446685 - PMCID: PMC4948609 - DOI: 10.1364/BOE.7.002494

Kim M, An J, Kim KS, Choi M, Humar M, Kwok SJ, Dai T, Yun SH

Optical lens-microneedle array for percutaneous light delivery.
Biomed Opt Express. 2016;7(10):4220-4227 - PMID: 27867727 - PMCID: PMC5102534 - DOI: 10.1364/BOE.7.004220

Kim TS, Park HS, Jang SJ, Song JW, Cho HS, Kim S, Bouma BE, Kim JW, Oh WY

Single cardiac cycle three-dimensional intracoronary optical coherence tomography.
Biomed Opt Express. 2016;7(12):4847-4858 - PMID: 28018710 - PMCID: PMC5175536 - DOI: 10.1364/BOE.7.004847

Rico-Jimenez JJ, Campos-Delgado DU, Villiger M, Otsuka K, Bouma BE, Jo JA

Automatic classification of atherosclerotic plaques imaged with intravascular OCT.
Biomed Opt Express. 2016;7(10):4069-4085 - PMID: 27867716 - PMCID: PMC5102521 - DOI: 10.1364/BOE.7.004069

Ughi GJ, Gora MJ, Swager AF, Soomro A, Grant C, Tiernan A, Rosenberg M, Sauk JS, Nishioka NS, Tearney GJ

Automated segmentation and characterization of esophageal wall in vivo by tethered capsule optical coherence tomography endomicroscopy.
Biomed Opt Express. 2016;7(2):409-19 - PMID: 26977350 - PMCID: PMC4771459 - DOI: 10.1364/BOE.7.000409

Ruiz-Lopera S, Veysset D, Bouma BE, Uribe-Patarroyo N

Erratum: Wavenumber-space wavefront sensorless adaptive-optics for optical coherence tomography: publisher's note.
Biomed Opt Express. 2026;17(4):2007 - PMID: 42110994 - PMCID: PMC13155813 - DOI: 10.1364/BOE.599479

Price LJ, Zhang K, Haig H, Otero NJ, Repgen P, Valdes PA, Wise F, Ilday FÖ, Spring BQ

Erratum: Sub-50-femtosecond gain-managed amplified pulses enhance nonlinear ablation efficiency: publisher's note.
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Smith C, Langley A, Sankepalle D, Mallidi S, Bouma BE, Veysset D

Efficient algorithm for optimal wavelength selection in photoacoustic spectral unmixing.
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Wang K, Liu TM, Wu J, Horton NG, Lin CP, Xu C

Three-color femtosecond source for simultaneous excitation of three fluorescent proteins in two-photon fluorescence microscopy.
Biomed Opt Express. 2012;3(9):1972-7 - PMID: 23024893 - PMCID: PMC3447541 - DOI: 10.1364/BOE.3.001972

Turcotte R, Alt C, Mortensen LJ, Lin CP

Characterization of multiphoton microscopy in the bone marrow following intravital laser osteotomy.
Biomed Opt Express. 2014;5(10):3578-88 - PMID: 25360374 - PMCID: PMC4206326 - DOI: 10.1364/BOE.5.003578

Mortensen LJ, Alt C, Turcotte R, Masek M, Liu TM, Côté DC, Xu C, Intini G, Lin CP

Femtosecond laser bone ablation with a high repetition rate fiber laser source.
Biomed Opt Express. 2014;6(1):32-42 - PMID: 25657872 - PMCID: PMC4317121 - DOI: 10.1364/BOE.6.000032

Hwang W, McPartland T, Raymond T, Han M, Jeong S, Evans CL

Quantitative investigation of photobleaching-based autofluorescence suppression in formalin-fixed paraffin-embedded human tissue.
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Masoumi S, Lee J, Jones GL, Quémener M, Parent M, Bouma BE, Hariri LP, Côté DC, Villiger M

Absolute depth-resolved optic axis measurement with catheter-based polarization sensitive optical coherence tomography.
Biomed Opt Express. 2024;15(12):6957-6976 - PMID: 39679397 - PMCID: PMC11640563 - DOI: 10.1364/BOE.538560

Mansutti G, Villiger M, Bouma BE, Uribe-Patarroyo N

Full-field amplitude speckle decorrelation angiography.
Biomed Opt Express. 2024;15(10):5756-5772 - PMID: 39421771 - PMCID: PMC11482163 - DOI: 10.1364/BOE.530993

Chintada BR, Ruiz-Lopera S, Restrepo R, Bouma BE, Villiger M, Uribe-Patarroyo N

Probabilistic volumetric speckle suppression in OCT using deep learning.
Biomed Opt Express. 2024;15(8):4453-4469 - PMID: 39346991 - PMCID: PMC11427188 - DOI: 10.1364/BOE.523716

Jones GL, Albadawi H, Hariri LP, Bouma BE, Oklu R, Villiger M

Aging of deep venous thrombosis in-vivo using polarization sensitive optical coherence tomography.
Biomed Opt Express. 2024;15(6):3627-3638 - PMID: 38867781 - PMCID: PMC11166430 - DOI: 10.1364/BOE.522238

Bec J, Zhou X, Villiger M, Southard JA, Bouma B, Marcu L

Dual modality intravascular catheter system combining pulse-sampling fluorescence lifetime imaging and polarization-sensitive optical coherence tomography.
Biomed Opt Express. 2024;15(4):2114-2132 - PMID: 38633060 - PMCID: PMC11019710 - DOI: 10.1364/BOE.516515

Haft-Javaherian M, Villiger M, Otsuka K, Daemen J, Libby P, Golland P, Bouma BE

Segmentation of anatomical layers and imaging artifacts in intravascular polarization sensitive optical coherence tomography using attending physician and boundary cardinality losses.
Biomed Opt Express. 2024;15(3):1719-1738 - PMID: 38495711 - PMCID: PMC10942710 - DOI: 10.1364/BOE.514673

Photiou C, Thrapp A, Tearney G, Pitris C

Deep learning for the detection of colon polyps with malignant potential: ex vivo classification using feature-enhanced optical coherence tomography (OCT) images.
Biomed Opt Express. 2025;16(6):2543-2554 - PMID: 40677387 - PMCID: PMC12265449 - DOI: 10.1364/BOE.555185

Lee HC, Liu JJ, Sheikine Y, Aguirre AD, Connolly JL, Fujimoto JG

Ultrahigh speed spectral-domain optical coherence microscopy.
Biomed Opt Express. 2013;4(8):1236-54 - PMID: 24009989 - PMCID: PMC3756571 - DOI: 10.1364/BOE.4.001236

Pence IJ, Kuzma BA, Brinkmann M, Hellwig T, Evans CL

Multi-window sparse spectral sampling stimulated Raman scattering microscopy.
Biomed Opt Express. 2021;12(10):6095-6114 - PMID: 34745724 - PMCID: PMC8547998 - DOI: 10.1364/BOE.432177
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