Ruiz-Lopera S, Restrepo R, Cuartas-Velez C, Bouma BE, Uribe-Patarroyo N

Computational adaptive optics in phase-unstable optical coherence tomography.
Opt Lett. 2020;45(21):5982-5985 - PMID: 33137049 - PMCID: PMC8384075 - DOI: 10.1364/OL.401283

López-Marín A, Springeling G, Beurskens R, van Beusekom H, van der Steen AFW, Koch AD, Bouma BE, Huber R, van Soest G, Wang T

Motorized capsule for shadow-free OCT imaging and synchronous beam control.
Opt Lett. 2019;44(15):3641-3644 - PMID: 31368932 - DOI: 10.1364/OL.44.003641

Cui D, Chu KK, Yin B, Ford TN, Hyun C, Leung HM, Gardecki JA, Solomon GM, Birket SE, Liu L, Rowe SM, Tearney GJ

Flexible, high-resolution micro-optical coherence tomography endobronchial probe toward in vivo imaging of cilia.
Opt Lett. 2017;42(4):867-870 - PMID: 28198885 - PMCID: PMC5665567 - DOI: 10.1364/OL.42.000867

Khazaeinezhad R, Siddiqui M, Vakoc BJ

16  MHz wavelength-swept and wavelength-stepped laser architectures based on stretched-pulse active mode locking with a single continuously chirped fiber Bragg grating.
Opt Lett. 2017;42(10):2046-2049 - PMID: 28504745 - PMCID: PMC5521824 - DOI: 10.1364/OL.42.002046

Liang CP, Dong J, Ford T, Reddy R, Hosseiny H, Farrokhi H, Beatty M, Singh K, Osman H, Vuong B, Baldwin G, Grant C, Giddings S, Gora MJ, Rosenberg M, Nishioka N, Tearney G

Optical coherence tomography-guided laser marking with tethered capsule endomicroscopy in unsedated patients.
Biomed Opt Express. 2019;10(3):1207-1222 - PMID: 30891340 - PMCID: PMC6420285 - DOI: 10.1364/BOE.10.001207

Liu Z, Mackay S, Gordon DM, Anderson JD, Haithcock DW, Garson CJ, Tearney GJ, Solomon GM, Pant K, Prabhakarpandian B, Rowe SM, Guimbellot JS

Co-cultured microfluidic model of the airway optimized for microscopy and micro-optical coherence tomography imaging.
Biomed Opt Express. 2019;10(10):5414-5430 - PMID: 31646055 - PMCID: PMC6788592 - DOI: 10.1364/BOE.10.005414

Lo WCY, Uribe-Patarroyo N, Hoebel K, Beaudette K, Villiger M, Nishioka NS, Vakoc BJ, Bouma BE

Balloon catheter-based radiofrequency ablation monitoring in porcine esophagus using optical coherence tomography.
Biomed Opt Express. 2019;10(4):2067-2089 - PMID: 31086717 - PMCID: PMC6484999 - DOI: 10.1364/BOE.10.002067

Walther J, Li Q, Villiger M, Farah CS, Koch E, Karnowski K, Sampson DD

Depth-resolved birefringence imaging of collagen fiber organization in the human oral mucosa in vivo.
Biomed Opt Express. 2019;10(4):1942-1956 - PMID: 31086712 - PMCID: PMC6484997 - DOI: 10.1364/BOE.10.001942

Xiong Q, Wang N, Liu X, Chen S, Braganza CS, Bouma BE, Liu L, Villiger M

Constrained polarization evolution simplifies depth-resolved retardation measurements with polarization-sensitive optical coherence tomography.
Biomed Opt Express. 2019;10(10):5207-5222 - PMID: 31646042 - PMCID: PMC6788597 - DOI: 10.1364/BOE.10.005207

Sankepalle DM, Langley A, Hasan T, Mallidi S

Custom-designed Verasonics-based multi-wavelength photoacoustic and ultrasound imaging: from technical advances to preclinical applications in cancer.
Biomed Opt Express. 2025;16(12):5279-5298 - PMID: 41394496 - PMCID: PMC12698091 - DOI: 10.1364/BOE.577766

Price LJ, Zhang K, Otero NJ, Repgen P, Valdes PA, Wise F, Ilday FÖ, Spring BQ

Sub-50-femtosecond gain-managed amplified pulses enhance nonlinear ablation efficiency.
Biomed Opt Express. 2025;17(1):202-216 - PMID: 41532132 - PMCID: PMC12795435 - DOI: 10.1364/BOE.582102

Luna SK, Kuzma BA, Lemberger NS, Wallmeier K, Fallnich C, Evans CL

Adaptive optics stimulated Raman scattering microscopy for topical product pharmacokinetic imaging.
Biomed Opt Express. 2025;17(1):125-144 - PMID: 41532102 - PMCID: PMC12795415 - DOI: 10.1364/BOE.576409

Ruiz-Lopera S, Veysset D, Bouma BE, Uribe-Patarroyo N

Wavenumber-space wavefront sensorless adaptive-optics for optical coherence tomography.
Biomed Opt Express. 2025;17(1):282-293 - PMID: 41532101 - PMCID: PMC12795413 - DOI: 10.1364/BOE.582534

Im J, Schulz-Hildebrandt H, Yue M, Kim J, Tearney GJ

Label-free subcellular imaging with dynamic spectrally encoded confocal microscopy (D-SECM) with subpixel jitter correction.
Biomed Opt Express. 2026;17(2):512-526 - PMID: 41693877 - PMCID: PMC12904563 - DOI: 10.1364/BOE.582249

Bagramyan A, Wu JW, Mirsanaye K, Alt C, Lin CP

Towards noninvasive white blood cell count.
Biomed Opt Express. 2025;16(5):1988-1998 - PMID: 41767933 - PMCID: PMC12945479 - DOI: 10.1364/BOE.555588

Bouma BE, Villiger M, Otsuka K, Oh WY

Intravascular optical coherence tomography [Invited].
Biomed Opt Express. 2017;8(5):2660-2686 - PMID: 28663897 - PMCID: PMC5480504 - DOI: 10.1364/BOE.8.002660

Gora MJ, Suter MJ, Tearney GJ, Li X

Endoscopic optical coherence tomography: technologies and clinical applications [Invited].
Biomed Opt Express. 2017;8(5):2405-2444 - PMID: 28663882 - PMCID: PMC5480489 - DOI: 10.1364/BOE.8.002405

Hajjarian Z, Tshikudi DM, Nadkarni SK

Evaluating platelet aggregation dynamics from laser speckle fluctuations.
Biomed Opt Express. 2017;8(7):3502-3515 - PMID: 28717586 - PMCID: PMC5508847 - DOI: 10.1364/BOE.8.003502

Izatt JA, Boppart S, Bouma B, de Boer J, Drexler W, Li X, Yasuno Y

Introduction to the feature issue on the 25 year anniversary of optical coherence tomography.
Biomed Opt Express. 2017;8(7):3289-3291 - PMID: 28717567 - PMCID: PMC5508828 - DOI: 10.1364/BOE.8.003289

Liu X, Beaudette K, Wang X, Liu L, Bouma BE, Villiger M

Tissue-like phantoms for quantitative birefringence imaging.
Biomed Opt Express. 2017;8(10):4454-4465 - PMID: 29082077 - PMCID: PMC5654792 - DOI: 10.1364/BOE.8.004454

Wang J, Hosoda M, Tshikudi DM, Hajjarian Z, Nadkarni SK

Intraluminal laser speckle rheology using an omni-directional viewing catheter.
Biomed Opt Express. 2016;8(1):137-150 - PMID: 28101407 - PMCID: PMC5231287 - DOI: 10.1364/BOE.8.000137

Wang K, Liu TM, Wu J, Horton NG, Lin CP, Xu C

Three-color femtosecond source for simultaneous excitation of three fluorescent proteins in two-photon fluorescence microscopy.
Biomed Opt Express. 2012;3(9):1972-7 - PMID: 23024893 - PMCID: PMC3447541 - DOI: 10.1364/BOE.3.001972

Turcotte R, Alt C, Mortensen LJ, Lin CP

Characterization of multiphoton microscopy in the bone marrow following intravital laser osteotomy.
Biomed Opt Express. 2014;5(10):3578-88 - PMID: 25360374 - PMCID: PMC4206326 - DOI: 10.1364/BOE.5.003578

Mortensen LJ, Alt C, Turcotte R, Masek M, Liu TM, Côté DC, Xu C, Intini G, Lin CP

Femtosecond laser bone ablation with a high repetition rate fiber laser source.
Biomed Opt Express. 2014;6(1):32-42 - PMID: 25657872 - PMCID: PMC4317121 - DOI: 10.1364/BOE.6.000032

Hwang W, McPartland T, Raymond T, Han M, Jeong S, Evans CL

Quantitative investigation of photobleaching-based autofluorescence suppression in formalin-fixed paraffin-embedded human tissue.
Biomed Opt Express. 2025;16(2):553-565 - PMID: 39958863 - PMCID: PMC11828445 - DOI: 10.1364/BOE.547033

Masoumi S, Lee J, Jones GL, Quémener M, Parent M, Bouma BE, Hariri LP, Côté DC, Villiger M

Absolute depth-resolved optic axis measurement with catheter-based polarization sensitive optical coherence tomography.
Biomed Opt Express. 2024;15(12):6957-6976 - PMID: 39679397 - PMCID: PMC11640563 - DOI: 10.1364/BOE.538560

Mansutti G, Villiger M, Bouma BE, Uribe-Patarroyo N

Full-field amplitude speckle decorrelation angiography.
Biomed Opt Express. 2024;15(10):5756-5772 - PMID: 39421771 - PMCID: PMC11482163 - DOI: 10.1364/BOE.530993

Chintada BR, Ruiz-Lopera S, Restrepo R, Bouma BE, Villiger M, Uribe-Patarroyo N

Probabilistic volumetric speckle suppression in OCT using deep learning.
Biomed Opt Express. 2024;15(8):4453-4469 - PMID: 39346991 - PMCID: PMC11427188 - DOI: 10.1364/BOE.523716

Jones GL, Albadawi H, Hariri LP, Bouma BE, Oklu R, Villiger M

Aging of deep venous thrombosis in-vivo using polarization sensitive optical coherence tomography.
Biomed Opt Express. 2024;15(6):3627-3638 - PMID: 38867781 - PMCID: PMC11166430 - DOI: 10.1364/BOE.522238

Bec J, Zhou X, Villiger M, Southard JA, Bouma B, Marcu L

Dual modality intravascular catheter system combining pulse-sampling fluorescence lifetime imaging and polarization-sensitive optical coherence tomography.
Biomed Opt Express. 2024;15(4):2114-2132 - PMID: 38633060 - PMCID: PMC11019710 - DOI: 10.1364/BOE.516515

Haft-Javaherian M, Villiger M, Otsuka K, Daemen J, Libby P, Golland P, Bouma BE

Segmentation of anatomical layers and imaging artifacts in intravascular polarization sensitive optical coherence tomography using attending physician and boundary cardinality losses.
Biomed Opt Express. 2024;15(3):1719-1738 - PMID: 38495711 - PMCID: PMC10942710 - DOI: 10.1364/BOE.514673

Photiou C, Thrapp A, Tearney G, Pitris C

Deep learning for the detection of colon polyps with malignant potential: ex vivo classification using feature-enhanced optical coherence tomography (OCT) images.
Biomed Opt Express. 2025;16(6):2543-2554 - PMID: 40677387 - PMCID: PMC12265449 - DOI: 10.1364/BOE.555185

Lee HC, Liu JJ, Sheikine Y, Aguirre AD, Connolly JL, Fujimoto JG

Ultrahigh speed spectral-domain optical coherence microscopy.
Biomed Opt Express. 2013;4(8):1236-54 - PMID: 24009989 - PMCID: PMC3756571 - DOI: 10.1364/BOE.4.001236

Pence IJ, Kuzma BA, Brinkmann M, Hellwig T, Evans CL

Multi-window sparse spectral sampling stimulated Raman scattering microscopy.
Biomed Opt Express. 2021;12(10):6095-6114 - PMID: 34745724 - PMCID: PMC8547998 - DOI: 10.1364/BOE.432177

Cascales JP, Roussakis E, Witthauer L, Goss A, Li X, Chen Y, Marks HL, Evans CL

Wearable device for remote monitoring of transcutaneous tissue oxygenation.
Biomed Opt Express. 2020;11(12):6989-7002 - PMID: 33408975 - PMCID: PMC7747925 - DOI: 10.1364/BOE.408850

Evans CL, Hermsmeier M, Yamamoto A, Chan KF

Visualizing topical drug uptake with conventional fluorescence microscopy and deep learning.
Biomed Opt Express. 2020;11(12):6864-6880 - PMID: 33408967 - PMCID: PMC7747892 - DOI: 10.1364/BOE.405502

Brinkmann M, Fast A, Hellwig T, Pence I, Evans CL, Fallnich C

Portable all-fiber dual-output widely tunable light source for coherent Raman imaging.
Biomed Opt Express. 2019;10(9):4437-4449 - PMID: 31565500 - PMCID: PMC6757451 - DOI: 10.1364/BOE.10.004437

Osseiran S, Cruz JD, Jeong S, Wang H, Fthenakis C, Evans CL

Characterizing stratum corneum structure, barrier function, and chemical content of human skin with coherent Raman scattering imaging.
Biomed Opt Express. 2018;9(12):6425-6443 - PMID: 31065440 - PMCID: PMC6490993 - DOI: 10.1364/BOE.9.006425

Hermsmeier M, Jeong S, Yamamoto A, Chen X, Nagavarapu U, Evans CL, Chan KF

Characterization of human cutaneous tissue autofluorescence: implications in topical drug delivery studies with fluorescence microscopy.
Biomed Opt Express. 2018;9(11):5400-5418 - PMID: 30460136 - PMCID: PMC6238944 - DOI: 10.1364/BOE.9.005400

Jeong S, Hermsmeier M, Osseiran S, Yamamoto A, Nagavarapu U, Chan KF, Evans CL

Visualization of drug distribution of a topical minocycline gel in human facial skin.
Biomed Opt Express. 2018;9(7):3434-3448 - PMID: 29984108 - PMCID: PMC6033575 - DOI: 10.1364/BOE.9.003434

Li Z, Navarro-Alvarez N, Keeley EJ, Nowell NH, Goncalves BMM, Huang CA, Evans CL

Non-invasive monitoring of skin inflammation using an oxygen-sensing paint-on bandage.
Biomed Opt Express. 2017;8(10):4640-4651 - PMID: 29082091 - PMCID: PMC5654806 - DOI: 10.1364/BOE.8.004640

Saytashev I, Glenn R, Murashova GA, Osseiran S, Spence D, Evans CL, Dantus M

Multiphoton excited hemoglobin fluorescence and third harmonic generation for non-invasive microscopy of stored blood.
Biomed Opt Express. 2016;7(9):3449-3460 - PMID: 27699111 - PMCID: PMC5030023 - DOI: 10.1364/BOE.7.003449

Li Z, Roussakis E, Koolen PG, Ibrahim AM, Kim K, Rose LF, Wu J, Nichols AJ, Baek Y, Birngruber R, Apiou-Sbirlea G, Matyal R, Huang T, Chan R, Lin SJ, Evans CL

Non-invasive transdermal two-dimensional mapping of cutaneous oxygenation with a rapid-drying liquid bandage.
Biomed Opt Express. 2014;5(11):3748-64 - PMID: 25426308 - PMCID: PMC4242015 - DOI: 10.1364/BOE.5.003748

Cannon TM, Bouma BE, Uribe-Patarroyo N

Mapping optical scattering properties to physical particle information in singly and multiply scattering samples.
Biomed Opt Express. 2023;14(8):4326-4348 - PMID: 37799686 - PMCID: PMC10549752 - DOI: 10.1364/BOE.494518

Jones GL, Xiong Q, Liu X, Bouma BE, Villiger M

Single-input polarization-sensitive optical coherence tomography through a catheter.
Biomed Opt Express. 2023;14(9):4609-4626 - PMID: 37791262 - PMCID: PMC10545192 - DOI: 10.1364/BOE.497123

Leitgeb RA, Bouma B, Grieve K, Hendon C, Podoleanu A, Wojtkowski M, Yasuno Y

30 Years of Optical Coherence Tomography: introduction to the feature issue.
Biomed Opt Express. 2023;14(10):5484-5487 - PMID: 37854547 - PMCID: PMC10581797 - DOI: 10.1364/BOE.505569

Bernstein L, Ramier A, Wu J, Aiello VD, Béland MJ, Lin CP, Yun SH

Ultrahigh resolution spectral-domain optical coherence tomography using the 1000-1600 nm spectral band.
Biomed Opt Express. 2022;13(4):1939-1947 - PMID: 35519264 - PMCID: PMC9045918 - DOI: 10.1364/BOE.443654

Vinas-Pena M, Feng X, Li GY, Yun SH

In situ measurement of the stiffness increase in the posterior sclera after UV-riboflavin crosslinking by optical coherence elastography.
Biomed Opt Express. 2022;13(10):5434-5446 - PMID: 36425630 - PMCID: PMC9664890 - DOI: 10.1364/BOE.463600

Cannon TM, Bouma BE, Uribe-Patarroyo N

Layer-based, depth-resolved computation of attenuation coefficients and backscattering fractions in tissue using optical coherence tomography.
Biomed Opt Express. 2021;12(8):5037-5056 - PMID: 34513241 - PMCID: PMC8407832 - DOI: 10.1364/BOE.427833

Hajjarian Z, Toussaint JD, Guerrero JL, Nadkarni SK

In-vivo mechanical characterization of coronary atherosclerotic plaques in living swine using intravascular laser speckle imaging.
Biomed Opt Express. 2021;12(4):2064-2078 - PMID: 33996217 - PMCID: PMC8086462 - DOI: 10.1364/BOE.418939
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