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Lee H, Alt C, Pitsillides CM, Puoris'haag M, Lin CP

In vivo imaging flow cytometer.
Opt Express. 2006;14(17):7789-800 - PMID: 19529148 - PMCID: PMC2801598 - DOI: 10.1364/oe.14.007789

Li C, Pastila RK, Pitsillides C, Runnels JM, Puoris'haag M, Côté D, Lin CP

Imaging leukocyte trafficking in vivo with two-photon-excited endogenous tryptophan fluorescence.
Opt Express. 2010;18(2):988-99 - PMID: 20173920 - PMCID: PMC3369551 - DOI: 10.1364/OE.18.000988

Chen Y, Aguirre AD, Hsiung PL, Huang SW, Mashimo H, Schmitt JM, Fujimoto JG

Effects of axial resolution improvement on optical coherence tomography (OCT) imaging of gastrointestinal tissues.
Opt Express. 2008;16(4):2469-85 - PMID: 18542326 - DOI: 10.1364/oe.16.002469

Huang SW, Aguirre AD, Huber RA, Adler DC, Fujimoto JG

Swept source optical coherence microscopy using a Fourier domain mode-locked laser.
Opt Express. 2007;15(10):6210-7 - PMID: 19546926 - DOI: 10.1364/oe.15.006210

Aguirre AD, Sawinski J, Huang SW, Zhou C, Denk W, Fujimoto JG

High speed optical coherence microscopy with autofocus adjustment and a miniaturized endoscopic imaging probe.
Opt Express. 2010;18(5):4222-39 - PMID: 20389435 - PMCID: PMC2908909 - DOI: 10.1364/OE.18.004222

Aguirre AD, Hertz PR, Chen Y, Fujimoto JG, Piyawattanametha W, Fan L, Wu MC

Two-axis MEMS Scanning Catheter for Ultrahigh Resolution Three-dimensional and En Face Imaging.
Opt Express. 2007;15(5):2445-53 - PMID: 19532481 - DOI: 10.1364/oe.15.002445

Herz P, Chen Y, Aguirre A, Fujimoto J, Mashimo H, Schmitt J, Koski A, Goodnow J, Petersen C

Ultrahigh resolution optical biopsy with endoscopic optical coherence tomography.
Opt Express. 2004;12(15):3532-42 - PMID: 19483882 - DOI: 10.1364/opex.12.003532

Aguirre A, Nishizawa N, Fujimoto J, Seitz W, Lederer M, Kopf D

Continuum generation in a novel photonic crystal fiber for ultrahigh resolution optical coherence tomography at 800 nm and 1300 nm.
Opt Express. 2006;14(3):1145-60 - PMID: 19503436 - DOI: 10.1364/oe.14.001145

de Groot M, Evans CL, de Boer JF

Self-interference fluorescence microscopy: three dimensional fluorescence imaging without depth scanning.
Opt Express. 2012;20(14):15253-62 - PMID: 22772223 - PMCID: PMC3601652 - DOI: 10.1364/OE.20.015253

Joo C, Evans CL, Stepinac T, Hasan T, de Boer JF

Diffusive and directional intracellular dynamics measured by field-based dynamic light scattering.
Opt Express. 2010;18(3):2858-71 - PMID: 20174115 - PMCID: PMC2839546 - DOI: 10.1364/OE.18.002858

Evans CL, Rizvi I, Hasan T, de Boer JF

In vitro ovarian tumor growth and treatment response dynamics visualized with time-lapse OCT imaging.
Opt Express. 2009;17(11):8892-906 - PMID: 19466138 - PMCID: PMC2836890 - DOI: 10.1364/oe.17.008892

Evans CL, Xu X, Kesari S, Xie XS, Wong ST, Young GS

Chemically-selective imaging of brain structures with CARS microscopy.
Opt Express. 2007;15(19):12076-87 - PMID: 19547572 - DOI: 10.1364/oe.15.012076

Legare; F, Evans CL, Ganikhanov F, Xie XS

Towards CARS Endoscopy.
Opt Express. 2006;14(10):4427-32 - PMID: 19516594 - DOI: 10.1364/oe.14.004427

Singh AP, Göb M, Ahrens M, Eixmann T, Schulte B, Schulz-Hildebrandt H, Hüttmann G, Ellrichmann M, Huber R, Rahlves M

Virtual Hall sensor triggered multi-MHz endoscopic OCT imaging for stable real-time visualization.
Opt Express. 2024;32(4):5809-5825 - PMID: 38439298 - DOI: 10.1364/OE.514636

Wong KKY, Wei X, Ji N, Polli D, Vakoc BJ

Feature issue introduction: ultrafast optical imaging.
Opt Express. 2023;31(5):8201-8204 - PMID: 36859936 - DOI: 10.1364/OE.486054

Liu G, Kang JW, Bhagavatula S, Ahn SW, So PTC, Tearney GJ, Jonas O

Bendable long graded index lens microendoscopy.
Opt Express. 2022;30(20):36651-36664 - PMID: 36258589 - PMCID: PMC9662600 - DOI: 10.1364/OE.468827

Dannenberg PH, Wang J, Zhuo Y, Cho S, Kim KH, Yun SH

Droplet microfluidic generation of a million optical microparticle barcodes.
Opt Express. 2021;29(23):38109-38118 - PMID: 34808870 - PMCID: PMC8687102 - DOI: 10.1364/OE.439143

Lee SY, Hui PC, Bouma B, Villiger M

Single-shot depth profiling by spatio-temporal encoding with a multimode fiber.
Opt Express. 2020;28(2):1124-1138 - PMID: 32121828 - PMCID: PMC7053500 - DOI: 10.1364/OE.383145

Henry FP, Côté D, Randolph MA, Rust EAZ, Redmond RW, Kochevar IE, Lin CP, Winograd JM

Real-time in vivo assessment of the nerve microenvironment with coherent anti-Stokes Raman scattering microscopy.
Plast Reconstr Surg. 2009;123(2 Suppl):123S-130S - PMID: 19182671 - DOI: 10.1097/PRS.0b013e318191c5b8

Koolen PGL, Li Z, Roussakis E, Paul MA, Ibrahim AMS, Matyal R, Huang T, Evans CL, Lin SJ

Oxygen-Sensing Paint-On Bandage: Calibration of a Novel Approach in Tissue Perfusion Assessment.
Plast Reconstr Surg. 2017;140(1):89-96 - PMID: 28654595 - DOI: 10.1097/PRS.0000000000003421

Garibyan L, Moradi Tuchayi S, Javorsky E, Farinelli WA, Wang Y, Purschke M, Tam J, Ni P, Lian CG, Anderson RR

Subcutaneous Fat Reduction with Injected Ice Slurry.
Plast Reconstr Surg. 2020;145(4):725e-733e - PMID: 32221206 - DOI: 10.1097/PRS.0000000000006658

Fairbairn NG, Ng-Glazier J, Meppelink AM, Randolph MA, Winograd JM, Redmond RW

Improving Outcomes in Immediate and Delayed Nerve Grafting of Peripheral Nerve Gaps Using Light-Activated Sealing of Neurorrhaphy Sites with Human Amnion Wraps.
Plast Reconstr Surg. 2016;137(3):887-895 - PMID: 26910669 - DOI: 10.1097/01.prs.0000479996.04255.60

Roussakis E, Cascales JP, Yoeli D, Cralley A, Goss A, Wiatrowski A, Carvalho M, Moore HB, Moore EE, Huang CA, Evans CL

Versatile, in-line optical oxygen tension sensors for continuous monitoring during ex vivo kidney perfusion.
Sens Diagn. 2024;3(6):1014-1019 - PMID: 38882471 - PMCID: PMC11170683 - DOI: 10.1039/d3sd00240c

Framme C, Alt C, Schnell S, Sherwood M, Brinkmann R, Lin CP

Selective targeting of the retinal pigment epithelium in rabbit eyes with a scanning laser beam.
Invest Ophthalmol Vis Sci. 2007;48(4):1782-92 - PMID: 17389512 - DOI: 10.1167/iovs.06-0797

Wei X, Runnels JM, Lin CP

Selective uptake of indocyanine green by reticulocytes in circulation.
Invest Ophthalmol Vis Sci. 2003;44(10):4489-96 - PMID: 14507897 - PMCID: PMC2830078 - DOI: 10.1167/iovs.03-0041

Alt C, Runnels JM, Mortensen LJ, Zaher W, Lin CP

In vivo imaging of microglia turnover in the mouse retina after ionizing radiation and dexamethasone treatment.
Invest Ophthalmol Vis Sci. 2014;55(8):5314-9 - PMID: 25082884 - DOI: 10.1167/iovs.14-14254

Germann JA, Martínez-Enríquez E, Martínez-García MC, Kochevar IE, Marcos S

Corneal Collagen Ordering After In Vivo Rose Bengal and Riboflavin Cross-Linking.
Invest Ophthalmol Vis Sci. 2020;61(3):28 - PMID: 32186674 - PMCID: PMC7401826 - DOI: 10.1167/iovs.61.3.28

Kwok SJJ, Forward S, Wertheimer CM, Liapis AC, Lin HH, Kim M, Seiler TG, Birngruber R, Kochevar IE, Seiler T, Yun SH

Selective Equatorial Sclera Crosslinking in the Orbit Using a Metal-Coated Polymer Waveguide.
Invest Ophthalmol Vis Sci. 2019;60(7):2563-2570 - PMID: 31212308 - PMCID: PMC6586079 - DOI: 10.1167/iovs.19-26709

Seiler TG, Batista A, Frueh BE, Koenig K

Riboflavin Concentrations at the Endothelium During Corneal Cross-Linking in Humans.
Invest Ophthalmol Vis Sci. 2019;60(6):2140-2145 - PMID: 31099830 - DOI: 10.1167/iovs.19-26686

Wertheimer CM, Elhardt C, Kaminsky SM, Pham L, Pei Q, Mendes B, Afshar S, Kochevar IE

Enhancing Rose Bengal-Photosensitized Protein Crosslinking in the Cornea.
Invest Ophthalmol Vis Sci. 2019;60(6):1845-1852 - PMID: 31042790 - DOI: 10.1167/iovs.19-26604

Kwok SJJ, Kim M, Lin HH, Seiler TG, Beck E, Shao P, Kochevar IE, Seiler T, Yun SH

Flexible Optical Waveguides for Uniform Periscleral Cross-Linking.
Invest Ophthalmol Vis Sci. 2017;58(5):2596-2602 - PMID: 28494493 - PMCID: PMC5433838 - DOI: 10.1167/iovs.17-21559

Williams M, Lewis W, Franco W

Loss of Tryptophan Fluorescence Correlates With Mechanical Stiffness Following Photo-Crosslinking Treatment of Rabbit Cornea.
Invest Ophthalmol Vis Sci. 2017;58(2):1110-1115 - PMID: 28196224 - DOI: 10.1167/iovs.16-20750

Besner S, Scarcelli G, Pineda R, Yun SH

In Vivo Brillouin Analysis of the Aging Crystalline Lens.
Invest Ophthalmol Vis Sci. 2016;57(13):5093-5100 - PMID: 27699407 - PMCID: PMC5054731 - DOI: 10.1167/iovs.16-20143

Fadlallah A, Zhu H, Arafat S, Kochevar I, Melki S, Ciolino JB

Corneal Resistance to Keratolysis After Collagen Crosslinking With Rose Bengal and Green Light.
Invest Ophthalmol Vis Sci. 2016;57(15):6610-6614 - PMID: 27926752 - DOI: 10.1167/iovs.15-18764

Liu C, Vojnovic D, Kochevar IE, Jurkunas UV

UV-A Irradiation Activates Nrf2-Regulated Antioxidant Defense and Induces p53/Caspase3-Dependent Apoptosis in Corneal Endothelial Cells.
Invest Ophthalmol Vis Sci. 2016;57(4):2319-27 - PMID: 27127932 - PMCID: PMC4855825 - DOI: 10.1167/iovs.16-19097

Runnels JM, Zamiri P, Spencer JA, Veilleux I, Wei X, Bogdanov A, Lin CP

Imaging molecular expression on vascular endothelial cells by in vivo immunofluorescence microscopy.
Mol Imaging. 2006;5(1):31-40 - PMID: 16779968 - PMCID: PMC2801601

Wei X, Sipkins DA, Pitsillides CM, Novak J, Georgakoudi I, Lin CP

Real-time detection of circulating apoptotic cells by in vivo flow cytometry.
Mol Imaging. 2005;4(4):415-6 - PMID: 16285902 - PMCID: PMC2801924 - DOI: 10.2310/7290.2005.05148

Ayers BC, Aguirre AD, Sundt TM, Lu MT, Jassar A

An open-source, automated machine learning approach for large-scale image retrieval for thoracic aorta analysis studies.
JAMIA Open. 2025;8(4):ooaf066 - PMID: 40662082 - PMCID: PMC12257624 - DOI: 10.1093/jamiaopen/ooaf066

Alt C, Veilleux I, Lee H, Pitsillides CM, Côté D, Lin CP

Retinal flow cytometer.
Opt Lett. 2007;32(23):3450-2 - PMID: 18059963 - PMCID: PMC2794483 - DOI: 10.1364/ol.32.003450

Swanson EA, Izatt JA, Hee MR, Huang D, Lin CP, Schuman JS, Puliafito CA, Fujimoto JG

In vivo retinal imaging by optical coherence tomography.
Opt Lett. 1993;18(21):1864-6 - PMID: 19829430 - DOI: 10.1364/ol.18.001864

Rao Chintada B, Keahey P, Uribe-Patarroyo N, Bouma BE, Villiger M

Sample tilting for speckle suppression through angular compounding.
Opt Lett. 2024;49(17):4979-4982 - PMID: 39208013 - PMCID: PMC11827440 - DOI: 10.1364/OL.533271

Liu G, Ahn SW, Kang JW, Bhagavatula S, Matthew D, Martin S, Marlin C, So PTC, Tearney GJ, Jonas O

Two-site microendoscopic imaging probe for simultaneous three-dimensional imaging at two anatomic locations in tissues.
Opt Lett. 2024;49(12):3312-3315 - PMID: 38875608 - PMCID: PMC11298057 - DOI: 10.1364/OL.525945

Schulz-Hildebrandt H, Gardecki JA, Miller T, Avila-Wallace M, Villareyna-Lopez E, Tearney G

Phase-sensitive dynamic micro-optical coherence tomography for high-speed intracellular motion imaging.
Opt Lett. 2025;50(15):4734-4737 - PMID: 40751978 - PMCID: PMC12801154 - DOI: 10.1364/OL.563024

Chen Y, Huang SW, Aguirre AD, Fujimoto JG

High-resolution line-scanning optical coherence microscopy.
Opt Lett. 2007;32(14):1971-3 - PMID: 17632613 - DOI: 10.1364/ol.32.001971

Aguirre AD, Hsiung P, Ko TH, Hartl I, Fujimoto JG

High-resolution optical coherence microscopy for high-speed, in vivo cellular imaging.
Opt Lett. 2003;28(21):2064-6 - PMID: 14587816 - DOI: 10.1364/ol.28.002064

Ganikhanov F, Evans CL, Saar BG, Xie XS

High-sensitivity vibrational imaging with frequency modulation coherent anti-Stokes Raman scattering (FM CARS) microscopy.
Opt Lett. 2006;31(12):1872-4 - PMID: 16729099 - DOI: 10.1364/ol.31.001872

Potma EO, Evans CL, Xie XS

Heterodyne coherent anti-Stokes Raman scattering (CARS) imaging.
Opt Lett. 2006;31(2):241-3 - PMID: 16441043 - DOI: 10.1364/ol.31.000241

Evans CL, Potma EO, Xie XS

Coherent anti-stokes raman scattering spectral interferometry: determination of the real and imaginary components of nonlinear susceptibility chi(3) for vibrational microscopy.
Opt Lett. 2004;29(24):2923-5 - PMID: 15645825 - DOI: 10.1364/ol.29.002923

Potma EO, Evans C, Xie XS, Jones RJ, Ye J

Picosecond-pulse amplification with an external passive optical cavity.
Opt Lett. 2003;28(19):1835-7 - PMID: 14514117 - DOI: 10.1364/ol.28.001835

Ruiz-Lopera S, Restrepo R, Cannon TM, Villiger M, Bouma BE, Uribe-Patarroyo N

Computational refocusing in phase-unstable polarization-sensitive optical coherence tomography.
Opt Lett. 2023;48(18):4765-4768 - PMID: 37707897 - PMCID: PMC10871002 - DOI: 10.1364/OL.499051
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