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Tripathi MM, Egawa S, Wirth AG, Tshikudi DM, Van Cott EM, Nadkarni SK

Clinical evaluation of whole blood prothrombin time (PT) and international normalized ratio (INR) using a Laser Speckle Rheology sensor.
Sci Rep. 2017;7(1):9169 - PMID: 28835607 - PMCID: PMC5569083 - DOI: 10.1038/s41598-017-08693-5

Turcotte R, Alt C, Runnels JM, Ito K, Wu JW, Zaher W, Mortensen LJ, Silberstein L, Côté DC, Kung AL, Ito K, Lin CP

Image-guided transplantation of single cells in the bone marrow of live animals.
Sci Rep. 2017;7(1):3875 - PMID: 28634334 - PMCID: PMC5478633 - DOI: 10.1038/s41598-017-02896-6

Blatter C, Meijer EF, Nam AS, Jones D, Bouma BE, Padera TP, Vakoc BJ

In vivo label-free measurement of lymph flow velocity and volumetric flow rates using Doppler optical coherence tomography.
Sci Rep. 2016;6:29035 - PMID: 27377852 - PMCID: PMC4932526 - DOI: 10.1038/srep29035

Hajjarian Z, Nia HT, Ahn S, Grodzinsky AJ, Jain RK, Nadkarni SK

Laser Speckle Rheology for evaluating the viscoelastic properties of hydrogel scaffolds.
Sci Rep. 2016;6:37949 - PMID: 27905494 - PMCID: PMC5131361 - DOI: 10.1038/srep37949

Iyer JS, Batts SA, Chu KK, Sahin MI, Leung HM, Tearney GJ, Stankovic KM

Micro-optical coherence tomography of the mammalian cochlea.
Sci Rep. 2016;6:33288 - PMID: 27633610 - PMCID: PMC5025881 - DOI: 10.1038/srep33288

Kwok SJ, Choi M, Bhayana B, Zhang X, Ran C, Yun SH

Two-photon excited photoconversion of cyanine-based dyes.
Sci Rep. 2016;6:23866 - PMID: 27029524 - PMCID: PMC4814926 - DOI: 10.1038/srep23866

Mao Z, Wu JH, Dong T, Wu MX

Additive enhancement of wound healing in diabetic mice by low level light and topical CoQ10.
Sci Rep. 2016;6:20084 - PMID: 26830658 - PMCID: PMC4735721 - DOI: 10.1038/srep20084

Shahid M, Javed AA, Chandra D, Ramsey HE, Shah D, Khan MF, Zhao L, Wu MX

IEX-1 deficiency induces browning of white adipose tissue and resists diet-induced obesity.
Sci Rep. 2016;6:24135 - PMID: 27063893 - PMCID: PMC4827096 - DOI: 10.1038/srep24135

Villiger M, Lorenser D, McLaughlin RA, Quirk BC, Kirk RW, Bouma BE, Sampson DD

Deep tissue volume imaging of birefringence through fibre-optic needle probes for the delineation of breast tumour.
Sci Rep. 2016;6:28771 - PMID: 27364229 - PMCID: PMC4929466 - DOI: 10.1038/srep28771

Wang S, Hüttmann G, Scholzen T, Zhang Z, Vogel A, Hasan T, Rahmanzadeh R

A light-controlled switch after dual targeting of proliferating tumor cells via the membrane receptor EGFR and the nuclear protein Ki-67.
Sci Rep. 2016;6:27032 - PMID: 27246531 - PMCID: PMC4887907 - DOI: 10.1038/srep27032

Wu JW, Turcotte R, Alt C, Runnels JM, Tsao H, Lin CP

Defining Clonal Color in Fluorescent Multi-Clonal Tracking.
Sci Rep. 2016;6:24303 - PMID: 27073117 - PMCID: PMC4829845 - DOI: 10.1038/srep24303

Yang J, Zhang Q, Li P, Dong T, Wu MX

Low-level light treatment ameliorates immune thrombocytopenia.
Sci Rep. 2016;6:38238 - PMID: 27901126 - PMCID: PMC5128784 - DOI: 10.1038/srep38238

Zhang J, Fiore A, Yun SH, Kim H, Scarcelli G

Line-scanning Brillouin microscopy for rapid non-invasive mechanical imaging.
Sci Rep. 2016;6:35398 - PMID: 27739499 - PMCID: PMC5064313 - DOI: 10.1038/srep35398

Gerbaud E, Weisz G, Tanaka A, Kashiwagi M, Shimizu T, Wang L, Souza C, Bouma BE, Suter MJ, Shishkov M, Ughi GJ, Halpern EF, Rosenberg M, Waxman S, Moses JW, Mintz GS, Maehara A, Tearney GJ

Multi-laboratory inter-institute reproducibility study of IVOCT and IVUS assessments using published consensus document definitions.
Eur Heart J Cardiovasc Imaging. 2015;17(7):756-64 - PMID: 26377904 - PMCID: PMC4907381 - DOI: 10.1093/ehjci/jev229

Gerbaud E, Weisz G, Tanaka A, Luu R, Osman HASH, Baldwin G, Coste P, Cognet L, Waxman S, Zheng H, Moses JW, Mintz GS, Akasaka T, Maehara A, Tearney GJ

Plaque burden can be assessed using intravascular optical coherence tomography and a dedicated automated processing algorithm: a comparison study with intravascular ultrasound.
Eur Heart J Cardiovasc Imaging. 2020;21(6):640-652 - PMID: 31326995 - PMCID: PMC7237959 - DOI: 10.1093/ehjci/jez185

Minami Y, Ong DS, Uemura S, Wang Z, Aguirre AD, Mukhopadhyay S, Soeda T, Vergallo R, Jia H, Tian J, Hu S, Kim SJ, Park CB, Dauerman HL, Lee S, Jang IK

Impacts of lesion angle on incidence and distribution of acute vessel wall injuries and strut malapposition after drug-eluting stent implantation assessed by optical coherence tomography.
Eur Heart J Cardiovasc Imaging. 2015;16(12):1390-8 - PMID: 25925215 - DOI: 10.1093/ehjci/jev108

Vijaykumar K, Leung HM, Barrios A, Fernandez-Petty CM, Solomon GM, Hathorne HY, Wade JD, Monroe K, Slaten KB, Li Q, Leal SM, Moates DB, Pierce HM, Olson KR, Currier P, Foster S, Marsden D, Tearney GJ, Rowe SM

COVID-19 Causes Ciliary Dysfunction as Demonstrated by Human Intranasal Micro-Optical Coherence Tomography Imaging.
Am J Respir Cell Mol Biol. 2023;69(5):592-595 - PMID: 38195114 - PMCID: PMC10633845 - DOI: 10.1165/rcmb.2023-0177LE

Adewale AT, Falk Libby E, Fu L, Lenzie A, Boitet ER, Birket SE, Petty CF, Johns JD, Mazur M, Tearney GJ, Copeland D, Durham C, Rowe SM

Novel Therapy of Bicarbonate, Glutathione, and Ascorbic Acid Improves Cystic Fibrosis Mucus Transport.
Am J Respir Cell Mol Biol. 2020;63(3):362-373 - PMID: 32374624 - PMCID: PMC7462336 - DOI: 10.1165/rcmb.2019-0287OC

Raju SV, Lin VY, Liu L, McNicholas CM, Karki S, Sloane PA, Tang L, Jackson PL, Wang W, Wilson L, Macon KJ, Mazur M, Kappes JC, DeLucas LJ, Barnes S, Kirk K, Tearney GJ, Rowe SM

The Cystic Fibrosis Transmembrane Conductance Regulator Potentiator Ivacaftor Augments Mucociliary Clearance Abrogating Cystic Fibrosis Transmembrane Conductance Regulator Inhibition by Cigarette Smoke.
Am J Respir Cell Mol Biol. 2017;56(1):99-108 - PMID: 27585394 - PMCID: PMC5248967 - DOI: 10.1165/rcmb.2016-0226OC

Kravez E, Villiger M, Bouma B, Yarmush M, Yakhini Z, Golberg A

Prediction of Scar Size in Rats Six Months after Burns Based on Early Post-injury Polarization-Sensitive Optical Frequency Domain Imaging.
Front Physiol. 2017;8:967 - PMID: 29249978 - PMCID: PMC5717021 - DOI: 10.3389/fphys.2017.00967

Bassir SH, Garakani S, Wilk K, Aldawood ZA, Hou J, Yeh SA, Sfeir C, Lin CP, Intini G

Prx1 Expressing Cells Are Required for Periodontal Regeneration of the Mouse Incisor.
Front Physiol. 2019;10:591 - PMID: 31231227 - PMCID: PMC6558369 - DOI: 10.3389/fphys.2019.00591

Nie Z, Yeh SA, LePalud M, Badr F, Tse F, Armstrong D, Liu LWC, Deen MJ, Fang Q

Optical Biopsy of the Upper GI Tract Using Fluorescence Lifetime and Spectra.
Front Physiol. 2020;11:339 - PMID: 32477151 - PMCID: PMC7237753 - DOI: 10.3389/fphys.2020.00339

McCullar KS, Abbaspour S, Wang W, Aguirre AD, Westover MB, Klerman EB

Timing of diuretic administration effects on urine volume in hospitalized patients.
Front Physiol. 2024;14:1208324 - PMID: 38321985 - PMCID: PMC10844419 - DOI: 10.3389/fphys.2023.1208324

Vinegoni C, Lee S, Aguirre AD, Weissleder R

New techniques for motion-artifact-free in vivo cardiac microscopy.
Front Physiol. 2015;6:147 - PMID: 26029116 - PMCID: PMC4428079 - DOI: 10.3389/fphys.2015.00147

Saad MA, Hasan T

Spotlight on Photoactivatable Liposomes beyond Drug Delivery: An Enabler of Multitargeting of Molecular Pathways.
Bioconjug Chem. 2022;33(11):2041-2064 - PMID: 36197738 - PMCID: PMC10351218 - DOI: 10.1021/acs.bioconjchem.2c00376

Saad MA, Grimaldo-Garcia S, Sweeney A, Mallidi S, Hasan T

Dual-Function Antibody Conjugate-Enabled Photoimmunotherapy Complements Fluorescence and Photoacoustic Imaging of Head and Neck Cancer Spheroids.
Bioconjug Chem. 2023;35(1):51-63 - PMID: 38128912 - PMCID: PMC10797594 - DOI: 10.1021/acs.bioconjchem.3c00406

Ahmed MS, Rodell CB, Hulsmans M, Kohler RH, Aguirre AD, Nahrendorf M, Weissleder R

A Supramolecular Nanocarrier for Delivery of Amiodarone Anti-Arrhythmic Therapy to the Heart.
Bioconjug Chem. 2019;30(3):733-740 - PMID: 30615425 - PMCID: PMC6483069 - DOI: 10.1021/acs.bioconjchem.8b00882

Koo H, Hahn SK, Yun SH

Controlled Detachment of Chemically Glued Cells.
Bioconjug Chem. 2016;27(11):2601-2604 - PMID: 27779857 - PMCID: PMC5505264 - DOI: 10.1021/acs.bioconjchem.6b00546

Tokarz D, Cisek R, Wein MN, Turcotte R, Haase C, Yeh SA, Bharadwaj S, Raphael AP, Paudel H, Alt C, Liu TM, Kronenberg HM, Lin CP

Intravital imaging of osteocytes in mouse calvaria using third harmonic generation microscopy.
PLoS One. 2017;12(10):e0186846 - PMID: 29065178 - PMCID: PMC5655444 - DOI: 10.1371/journal.pone.0186846

Carlson AL, Fujisaki J, Wu J, Runnels JM, Turcotte R, Spencer JA, Celso CL, Scadden DT, Strom TB, Lin CP

Tracking single cells in live animals using a photoconvertible near-infrared cell membrane label.
PLoS One. 2013;8(8):e69257 - PMID: 23990881 - PMCID: PMC3753322 - DOI: 10.1371/journal.pone.0069257

Mortensen LJ, Levy O, Phillips JP, Stratton T, Triana B, Ruiz JP, Gu F, Karp JM, Lin CP

Quantification of Mesenchymal Stem Cell (MSC) delivery to a target site using in vivo confocal microscopy.
PLoS One. 2013;8(10):e78145 - PMID: 24205131 - PMCID: PMC3812161 - DOI: 10.1371/journal.pone.0078145

Ong J, Nazarian A, Tam J, Farinelli W, Korupolu S, Drake L, Isaacson B, Pasquina P, Williams D

An antimicrobial blue light device to manage infection at the skin-implant interface of percutaneous osseointegrated implants.
PLoS One. 2023;18(8):e0290347 - PMID: 37624860 - PMCID: PMC10456172 - DOI: 10.1371/journal.pone.0290347

Evans CL, Abu-Yousif AO, Park YJ, Klein OJ, Celli JP, Rizvi I, Zheng X, Hasan T

Killing hypoxic cell populations in a 3D tumor model with EtNBS-PDT.
PLoS One. 2011;6(8):e23434 - PMID: 21876751 - PMCID: PMC3158086 - DOI: 10.1371/journal.pone.0023434

Jung Y, Ng JH, Keating CP, Senthil-Kumar P, Zhao J, Randolph MA, Winograd JM, Evans CL

Comprehensive evaluation of peripheral nerve regeneration in the acute healing phase using tissue clearing and optical microscopy in a rodent model.
PLoS One. 2014;9(4):e94054 - PMID: 24714405 - PMCID: PMC3979924 - DOI: 10.1371/journal.pone.0094054

Hiremath P, Bauer M, Aguirre AD, Cheng HW, Unno K, Patel RB, Harvey BW, Chang WT, Groarke JD, Liao R, Cheng S

Identifying early changes in myocardial microstructure in hypertensive heart disease.
PLoS One. 2014;9(5):e97424 - PMID: 24831515 - PMCID: PMC4022613 - DOI: 10.1371/journal.pone.0097424

Wu JW, Jung Y, Yeh SA, Seo Y, Runnels JM, Burns CS, Mizoguchi T, Ito K, Spencer JA, Lin CP

Intravital fluorescence microscopy with negative contrast.
PLoS One. 2021;16(8):e0255204 - PMID: 34351959 - PMCID: PMC8341626 - DOI: 10.1371/journal.pone.0255204

Pitsillides CM, Runnels JM, Spencer JA, Zhi L, Wu MX, Lin CP

Cell labeling approaches for fluorescence-based in vivo flow cytometry.
Cytometry A. 2011;79(10):758-65 - PMID: 21905206 - PMCID: PMC3686107 - DOI: 10.1002/cyto.a.21125

Zhang L, Alt C, Li P, White RM, Zon LI, Wei X, Lin CP

An optical platform for cell tracking in adult zebrafish.
Cytometry A. 2011;81(2):176-82 - PMID: 22162445 - PMCID: PMC6383206 - DOI: 10.1002/cyto.a.21167

Fahlberg MD, Forward S, Assita ER, Mazzola M, Kiem A, Handley M, Yun SH, Kwok SJJ

Overcoming fixation and permeabilization challenges in flow cytometry by optical barcoding and multi-pass acquisition.
Cytometry A. 2024;105(11):838-848 - PMID: 39467031 - PMCID: PMC12707249 - DOI: 10.1002/cyto.a.24904

Peng F, Jeong S, Ho A, Evans CL

Recent progress in plasmonic nanoparticle-based biomarker detection and cytometry for the study of central nervous system disorders.
Cytometry A. 2021;99(11):1067-1078 - PMID: 34328262 - DOI: 10.1002/cyto.a.24489

Pitsillides CM, Joe EK, Wei X, Anderson RR, Lin CP

Selective cell targeting with light-absorbing microparticles and nanoparticles.
Biophys J. 2003;84(6):4023-32 - PMID: 12770906 - PMCID: PMC1302982 - DOI: 10.1016/S0006-3495(03)75128-5

Chu KK, Mojahed D, Fernandez CM, Li Y, Liu L, Wilsterman EJ, Diephuis B, Birket SE, Bowers H, Martin Solomon G, Schuster BS, Hanes J, Rowe SM, Tearney GJ

Particle-Tracking Microrheology Using Micro-Optical Coherence Tomography.
Biophys J. 2016;111(5):1053-63 - PMID: 27602733 - PMCID: PMC5018123 - DOI: 10.1016/j.bpj.2016.07.020

Turcotte R, Mattson JM, Wu JW, Zhang Y, Lin CP

Molecular Order of Arterial Collagen Using Circular Polarization Second-Harmonic Generation Imaging.
Biophys J. 2016;110(3):530-533 - PMID: 26806883 - PMCID: PMC4744203 - DOI: 10.1016/j.bpj.2015.12.030

Shabahang S, Forward S, Yun SH

Polyethersulfone optical fibers with thermally induced microbubbles for custom side-scattering profiles.
Opt Express. 2019;27(5):7560-7567 - PMID: 30876318 - PMCID: PMC6825622 - DOI: 10.1364/OE.27.007560

Woodward RI, Majewski MR, Macadam N, Hu G, Albrow-Owen T, Hasan T, Jackson SD

Q-switched Dy:ZBLAN fiber lasers beyond 3 μm: comparison of pulse generation using acousto-optic modulation and inkjet-printed black phosphorus.
Opt Express. 2019;27(10):15032-15045 - PMID: 31163942 - DOI: 10.1364/OE.27.015032

Truong NTP, Shishkov M, Jahan D, Bouma BE, Suter MJ, Adams DC

Development and characterization of a clinically viable metalens-enhanced optical endoscope.
Opt Express. 2025;33(23):49200-49210 - PMID: 41414318 - DOI: 10.1364/OE.570460

Kassani SH, Villiger M, Uribe-Patarroyo N, Jun C, Khazaeinezhad R, Lippok N, Bouma BE

Extended bandwidth wavelength swept laser source for high resolution optical frequency domain imaging.
Opt Express. 2017;25(7):8255-8266 - PMID: 28380940 - PMCID: PMC5810910 - DOI: 10.1364/OE.25.008255

Yin B, Chu KK, Liang CP, Singh K, Reddy R, Tearney GJ

μOCT imaging using depth of focus extension by self-imaging wavefront division in a common-path fiber optic probe.
Opt Express. 2016;24(5):5555-5564 - PMID: 29092377 - PMCID: PMC5499634 - DOI: 10.1364/OE.24.005555

Kim M, Besner S, Ramier A, Kwok SJ, An J, Scarcelli G, Yun SH

Shear Brillouin light scattering microscope.
Opt Express. 2016;24(1):319-28 - PMID: 26832263 - PMCID: PMC4741352 - DOI: 10.1364/OE.24.000319

Shao P, Besner S, Zhang J, Scarcelli G, Yun SH

Etalon filters for Brillouin microscopy of highly scattering tissues.
Opt Express. 2016;24(19):22232-8 - PMID: 27661957 - PMCID: PMC5234497 - DOI: 10.1364/OE.24.022232
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