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Nguyen JQ, Marks HL, Everett T, Haire T, Carlsson A, Chan R, Evans CL

Early visualization of skin burn severity using a topically applied dye-loaded liquid bandage.
Sci Rep. 2020;10(1):9314 - PMID: 32518260 - PMCID: PMC7283312 - DOI: 10.1038/s41598-020-65747-x

Witthauer L, Roussakis E, Cascales JP, Goss A, Li X, Cralley A, Yoeli D, Moore HB, Wang Z, Wang Y, Li B, Huang CA, Moore EE, Evans CL

Development and in-vivo validation of a portable phosphorescence lifetime-based fiber-optic oxygen sensor.
Sci Rep. 2023;13(1):14782 - PMID: 37679415 - PMCID: PMC10484954 - DOI: 10.1038/s41598-023-41917-5

Moradi Tuchayi S, Wang Y, Khodorova A, Pence IJ, Stemmer-Rachamimov A, Evans CL, Anderson RR, Garibyan L

Fast-acting and injectable cryoneurolysis device.
Sci Rep. 2022;12(1):19891 - PMID: 36400878 - PMCID: PMC9674623 - DOI: 10.1038/s41598-022-24178-6

Cortes D, McTiernan CD, Ruel M, Franco W, Chu C, Liang W, Suuronen EJ, Alarcon EI

BEaTS-α an open access 3D printed device for in vitro electromechanical stimulation of human induced pluripotent stem cells.
Sci Rep. 2020;10(1):11274 - PMID: 32647145 - PMCID: PMC7347879 - DOI: 10.1038/s41598-020-67169-1

Klebanov N, Artomov M, Goggins WB, Daly E, Daly MJ, Tsao H

Burden of unique and low prevalence somatic mutations correlates with cancer survival.
Sci Rep. 2019;9(1):4848 - PMID: 30890735 - PMCID: PMC6425006 - DOI: 10.1038/s41598-019-41015-5

Mallidi S, Khan AP, Liu H, Daly L, Rudd G, Leon P, Khan S, Hussain BMA, Hasan SA, Siddique SA, Akhtar K, August M, Troulis M, Cuckov F, Celli JP, Hasan T

Platform for ergonomic intraoral photodynamic therapy using low-cost, modular 3D-printed components: Design, comfort and clinical evaluation.
Sci Rep. 2019;9(1):15830 - PMID: 31676807 - PMCID: PMC6825190 - DOI: 10.1038/s41598-019-51859-6

Shao P, Eltony AM, Seiler TG, Tavakol B, Pineda R, Koller T, Seiler T, Yun SH

Spatially-resolved Brillouin spectroscopy reveals biomechanical abnormalities in mild to advanced keratoconus in vivo.
Sci Rep. 2019;9(1):7467 - PMID: 31097778 - PMCID: PMC6522517 - DOI: 10.1038/s41598-019-43811-5

Razavi MS, Lei PJ, Amoozgar Z, O'Melia MJ, Roh K, Leartprapun N, Nadkarni SK, Baish JW, Padera TP, Munn LL

Macrophages recruited by implanted fibrin gels promote regeneration of injured lymphatic vessels.
Sci Rep. 2026;:ePub - PMID: 41862512 - DOI: 10.1038/s41598-026-39167-2

Bulin AL, Broekgaarden M, Hasan T

Comprehensive high-throughput image analysis for therapeutic efficacy of architecturally complex heterotypic organoids.
Sci Rep. 2017;7(1):16645 - PMID: 29192263 - PMCID: PMC5709388 - DOI: 10.1038/s41598-017-16622-9

Chu KK, Kusek ME, Liu L, Som A, Yonker LM, Leung H, Cui D, Ryu J, Eaton AD, Tearney GJ, Hurley BP

Illuminating dynamic neutrophil trans-epithelial migration with micro-optical coherence tomography.
Sci Rep. 2017;8:45789 - PMID: 28368012 - PMCID: PMC5377939 - DOI: 10.1038/srep45789

Nieskoski MD, Marra K, Gunn JR, Hoopes PJ, Doyley MM, Hasan T, Trembly BS, Pogue BW

Collagen Complexity Spatially Defines Microregions of Total Tissue Pressure in Pancreatic Cancer.
Sci Rep. 2017;7(1):10093 - PMID: 28855644 - PMCID: PMC5577321 - DOI: 10.1038/s41598-017-10671-w

Ren J, Choi H, Chung K, Bouma BE

Label-free volumetric optical imaging of intact murine brains.
Sci Rep. 2017;7:46306 - PMID: 28401897 - PMCID: PMC5388920 - DOI: 10.1038/srep46306

Tamayol A, Hassani Najafabadi A, Mostafalu P, Yetisen AK, Commotto M, Aldhahri M, Abdel-Wahab MS, Najafabadi ZI, Latifi S, Akbari M, Annabi N, Yun SH, Memic A, Dokmeci MR, Khademhosseini A

Biodegradable elastic nanofibrous platforms with integrated flexible heaters for on-demand drug delivery.
Sci Rep. 2017;7(1):9220 - PMID: 28835675 - PMCID: PMC5569034 - DOI: 10.1038/s41598-017-04749-8

Tripathi MM, Egawa S, Wirth AG, Tshikudi DM, Van Cott EM, Nadkarni SK

Clinical evaluation of whole blood prothrombin time (PT) and international normalized ratio (INR) using a Laser Speckle Rheology sensor.
Sci Rep. 2017;7(1):9169 - PMID: 28835607 - PMCID: PMC5569083 - DOI: 10.1038/s41598-017-08693-5

Turcotte R, Alt C, Runnels JM, Ito K, Wu JW, Zaher W, Mortensen LJ, Silberstein L, Côté DC, Kung AL, Ito K, Lin CP

Image-guided transplantation of single cells in the bone marrow of live animals.
Sci Rep. 2017;7(1):3875 - PMID: 28634334 - PMCID: PMC5478633 - DOI: 10.1038/s41598-017-02896-6

Gerbaud E, Weisz G, Tanaka A, Luu R, Osman HASH, Baldwin G, Coste P, Cognet L, Waxman S, Zheng H, Moses JW, Mintz GS, Akasaka T, Maehara A, Tearney GJ

Plaque burden can be assessed using intravascular optical coherence tomography and a dedicated automated processing algorithm: a comparison study with intravascular ultrasound.
Eur Heart J Cardiovasc Imaging. 2020;21(6):640-652 - PMID: 31326995 - PMCID: PMC7237959 - DOI: 10.1093/ehjci/jez185

Minami Y, Ong DS, Uemura S, Wang Z, Aguirre AD, Mukhopadhyay S, Soeda T, Vergallo R, Jia H, Tian J, Hu S, Kim SJ, Park CB, Dauerman HL, Lee S, Jang IK

Impacts of lesion angle on incidence and distribution of acute vessel wall injuries and strut malapposition after drug-eluting stent implantation assessed by optical coherence tomography.
Eur Heart J Cardiovasc Imaging. 2015;16(12):1390-8 - PMID: 25925215 - DOI: 10.1093/ehjci/jev108

Vijaykumar K, Leung HM, Barrios A, Fernandez-Petty CM, Solomon GM, Hathorne HY, Wade JD, Monroe K, Slaten KB, Li Q, Leal SM, Moates DB, Pierce HM, Olson KR, Currier P, Foster S, Marsden D, Tearney GJ, Rowe SM

COVID-19 Causes Ciliary Dysfunction as Demonstrated by Human Intranasal Micro-Optical Coherence Tomography Imaging.
Am J Respir Cell Mol Biol. 2023;69(5):592-595 - PMID: 38195114 - PMCID: PMC10633845 - DOI: 10.1165/rcmb.2023-0177LE

Adewale AT, Falk Libby E, Fu L, Lenzie A, Boitet ER, Birket SE, Petty CF, Johns JD, Mazur M, Tearney GJ, Copeland D, Durham C, Rowe SM

Novel Therapy of Bicarbonate, Glutathione, and Ascorbic Acid Improves Cystic Fibrosis Mucus Transport.
Am J Respir Cell Mol Biol. 2020;63(3):362-373 - PMID: 32374624 - PMCID: PMC7462336 - DOI: 10.1165/rcmb.2019-0287OC

Raju SV, Lin VY, Liu L, McNicholas CM, Karki S, Sloane PA, Tang L, Jackson PL, Wang W, Wilson L, Macon KJ, Mazur M, Kappes JC, DeLucas LJ, Barnes S, Kirk K, Tearney GJ, Rowe SM

The Cystic Fibrosis Transmembrane Conductance Regulator Potentiator Ivacaftor Augments Mucociliary Clearance Abrogating Cystic Fibrosis Transmembrane Conductance Regulator Inhibition by Cigarette Smoke.
Am J Respir Cell Mol Biol. 2017;56(1):99-108 - PMID: 27585394 - PMCID: PMC5248967 - DOI: 10.1165/rcmb.2016-0226OC

Kravez E, Villiger M, Bouma B, Yarmush M, Yakhini Z, Golberg A

Prediction of Scar Size in Rats Six Months after Burns Based on Early Post-injury Polarization-Sensitive Optical Frequency Domain Imaging.
Front Physiol. 2017;8:967 - PMID: 29249978 - PMCID: PMC5717021 - DOI: 10.3389/fphys.2017.00967

Bassir SH, Garakani S, Wilk K, Aldawood ZA, Hou J, Yeh SA, Sfeir C, Lin CP, Intini G

Prx1 Expressing Cells Are Required for Periodontal Regeneration of the Mouse Incisor.
Front Physiol. 2019;10:591 - PMID: 31231227 - PMCID: PMC6558369 - DOI: 10.3389/fphys.2019.00591

Nie Z, Yeh SA, LePalud M, Badr F, Tse F, Armstrong D, Liu LWC, Deen MJ, Fang Q

Optical Biopsy of the Upper GI Tract Using Fluorescence Lifetime and Spectra.
Front Physiol. 2020;11:339 - PMID: 32477151 - PMCID: PMC7237753 - DOI: 10.3389/fphys.2020.00339

McCullar KS, Abbaspour S, Wang W, Aguirre AD, Westover MB, Klerman EB

Timing of diuretic administration effects on urine volume in hospitalized patients.
Front Physiol. 2024;14:1208324 - PMID: 38321985 - PMCID: PMC10844419 - DOI: 10.3389/fphys.2023.1208324

Vinegoni C, Lee S, Aguirre AD, Weissleder R

New techniques for motion-artifact-free in vivo cardiac microscopy.
Front Physiol. 2015;6:147 - PMID: 26029116 - PMCID: PMC4428079 - DOI: 10.3389/fphys.2015.00147

Saad MA, Hasan T

Spotlight on Photoactivatable Liposomes beyond Drug Delivery: An Enabler of Multitargeting of Molecular Pathways.
Bioconjug Chem. 2022;33(11):2041-2064 - PMID: 36197738 - PMCID: PMC10351218 - DOI: 10.1021/acs.bioconjchem.2c00376

Saad MA, Grimaldo-Garcia S, Sweeney A, Mallidi S, Hasan T

Dual-Function Antibody Conjugate-Enabled Photoimmunotherapy Complements Fluorescence and Photoacoustic Imaging of Head and Neck Cancer Spheroids.
Bioconjug Chem. 2023;35(1):51-63 - PMID: 38128912 - PMCID: PMC10797594 - DOI: 10.1021/acs.bioconjchem.3c00406

Ahmed MS, Rodell CB, Hulsmans M, Kohler RH, Aguirre AD, Nahrendorf M, Weissleder R

A Supramolecular Nanocarrier for Delivery of Amiodarone Anti-Arrhythmic Therapy to the Heart.
Bioconjug Chem. 2019;30(3):733-740 - PMID: 30615425 - PMCID: PMC6483069 - DOI: 10.1021/acs.bioconjchem.8b00882

Carlson AL, Fujisaki J, Wu J, Runnels JM, Turcotte R, Spencer JA, Celso CL, Scadden DT, Strom TB, Lin CP

Tracking single cells in live animals using a photoconvertible near-infrared cell membrane label.
PLoS One. 2013;8(8):e69257 - PMID: 23990881 - PMCID: PMC3753322 - DOI: 10.1371/journal.pone.0069257

Mortensen LJ, Levy O, Phillips JP, Stratton T, Triana B, Ruiz JP, Gu F, Karp JM, Lin CP

Quantification of Mesenchymal Stem Cell (MSC) delivery to a target site using in vivo confocal microscopy.
PLoS One. 2013;8(10):e78145 - PMID: 24205131 - PMCID: PMC3812161 - DOI: 10.1371/journal.pone.0078145

Ong J, Nazarian A, Tam J, Farinelli W, Korupolu S, Drake L, Isaacson B, Pasquina P, Williams D

An antimicrobial blue light device to manage infection at the skin-implant interface of percutaneous osseointegrated implants.
PLoS One. 2023;18(8):e0290347 - PMID: 37624860 - PMCID: PMC10456172 - DOI: 10.1371/journal.pone.0290347

Evans CL, Abu-Yousif AO, Park YJ, Klein OJ, Celli JP, Rizvi I, Zheng X, Hasan T

Killing hypoxic cell populations in a 3D tumor model with EtNBS-PDT.
PLoS One. 2011;6(8):e23434 - PMID: 21876751 - PMCID: PMC3158086 - DOI: 10.1371/journal.pone.0023434

Jung Y, Ng JH, Keating CP, Senthil-Kumar P, Zhao J, Randolph MA, Winograd JM, Evans CL

Comprehensive evaluation of peripheral nerve regeneration in the acute healing phase using tissue clearing and optical microscopy in a rodent model.
PLoS One. 2014;9(4):e94054 - PMID: 24714405 - PMCID: PMC3979924 - DOI: 10.1371/journal.pone.0094054

Hiremath P, Bauer M, Aguirre AD, Cheng HW, Unno K, Patel RB, Harvey BW, Chang WT, Groarke JD, Liao R, Cheng S

Identifying early changes in myocardial microstructure in hypertensive heart disease.
PLoS One. 2014;9(5):e97424 - PMID: 24831515 - PMCID: PMC4022613 - DOI: 10.1371/journal.pone.0097424

Wu JW, Jung Y, Yeh SA, Seo Y, Runnels JM, Burns CS, Mizoguchi T, Ito K, Spencer JA, Lin CP

Intravital fluorescence microscopy with negative contrast.
PLoS One. 2021;16(8):e0255204 - PMID: 34351959 - PMCID: PMC8341626 - DOI: 10.1371/journal.pone.0255204

Tokarz D, Cisek R, Wein MN, Turcotte R, Haase C, Yeh SA, Bharadwaj S, Raphael AP, Paudel H, Alt C, Liu TM, Kronenberg HM, Lin CP

Intravital imaging of osteocytes in mouse calvaria using third harmonic generation microscopy.
PLoS One. 2017;12(10):e0186846 - PMID: 29065178 - PMCID: PMC5655444 - DOI: 10.1371/journal.pone.0186846

Pitsillides CM, Runnels JM, Spencer JA, Zhi L, Wu MX, Lin CP

Cell labeling approaches for fluorescence-based in vivo flow cytometry.
Cytometry A. 2011;79(10):758-65 - PMID: 21905206 - PMCID: PMC3686107 - DOI: 10.1002/cyto.a.21125

Zhang L, Alt C, Li P, White RM, Zon LI, Wei X, Lin CP

An optical platform for cell tracking in adult zebrafish.
Cytometry A. 2011;81(2):176-82 - PMID: 22162445 - PMCID: PMC6383206 - DOI: 10.1002/cyto.a.21167

Fahlberg MD, Forward S, Assita ER, Mazzola M, Kiem A, Handley M, Yun SH, Kwok SJJ

Overcoming fixation and permeabilization challenges in flow cytometry by optical barcoding and multi-pass acquisition.
Cytometry A. 2024;105(11):838-848 - PMID: 39467031 - PMCID: PMC12707249 - DOI: 10.1002/cyto.a.24904

Peng F, Jeong S, Ho A, Evans CL

Recent progress in plasmonic nanoparticle-based biomarker detection and cytometry for the study of central nervous system disorders.
Cytometry A. 2021;99(11):1067-1078 - PMID: 34328262 - DOI: 10.1002/cyto.a.24489

Pitsillides CM, Joe EK, Wei X, Anderson RR, Lin CP

Selective cell targeting with light-absorbing microparticles and nanoparticles.
Biophys J. 2003;84(6):4023-32 - PMID: 12770906 - PMCID: PMC1302982 - DOI: 10.1016/S0006-3495(03)75128-5

Lee H, Alt C, Pitsillides CM, Puoris'haag M, Lin CP

In vivo imaging flow cytometer.
Opt Express. 2006;14(17):7789-800 - PMID: 19529148 - PMCID: PMC2801598 - DOI: 10.1364/oe.14.007789

Liu G, Kang JW, Bhagavatula S, Ahn SW, So PTC, Tearney GJ, Jonas O

Bendable long graded index lens microendoscopy.
Opt Express. 2022;30(20):36651-36664 - PMID: 36258589 - PMCID: PMC9662600 - DOI: 10.1364/OE.468827

Li C, Pastila RK, Pitsillides C, Runnels JM, Puoris'haag M, Côté D, Lin CP

Imaging leukocyte trafficking in vivo with two-photon-excited endogenous tryptophan fluorescence.
Opt Express. 2010;18(2):988-99 - PMID: 20173920 - PMCID: PMC3369551 - DOI: 10.1364/OE.18.000988

Wong KKY, Wei X, Ji N, Polli D, Vakoc BJ

Feature issue introduction: ultrafast optical imaging.
Opt Express. 2023;31(5):8201-8204 - PMID: 36859936 - DOI: 10.1364/OE.486054

Dannenberg PH, Wang J, Zhuo Y, Cho S, Kim KH, Yun SH

Droplet microfluidic generation of a million optical microparticle barcodes.
Opt Express. 2021;29(23):38109-38118 - PMID: 34808870 - PMCID: PMC8687102 - DOI: 10.1364/OE.439143

Singh AP, Göb M, Ahrens M, Eixmann T, Schulte B, Schulz-Hildebrandt H, Hüttmann G, Ellrichmann M, Huber R, Rahlves M

Virtual Hall sensor triggered multi-MHz endoscopic OCT imaging for stable real-time visualization.
Opt Express. 2024;32(4):5809-5825 - PMID: 38439298 - DOI: 10.1364/OE.514636

Legare; F, Evans CL, Ganikhanov F, Xie XS

Towards CARS Endoscopy.
Opt Express. 2006;14(10):4427-32 - PMID: 19516594 - DOI: 10.1364/oe.14.004427

Lee SY, Hui PC, Bouma B, Villiger M

Single-shot depth profiling by spatio-temporal encoding with a multimode fiber.
Opt Express. 2020;28(2):1124-1138 - PMID: 32121828 - PMCID: PMC7053500 - DOI: 10.1364/OE.383145

Evans CL, Xu X, Kesari S, Xie XS, Wong ST, Young GS

Chemically-selective imaging of brain structures with CARS microscopy.
Opt Express. 2007;15(19):12076-87 - PMID: 19547572 - DOI: 10.1364/oe.15.012076
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