Bouma Lab

Chen C, Gu P, Villiger M, Uribe-Patarroyo N, Bouma B, Ren J

FUSION: A fast and uniform processing framework for whole-brain optical scattering tomography images.
bioRxiv. 2026;:ePub - PMID: 41542411 - PMCID: PMC12803274 - DOI: 10.64898/2026.01.06.698063

Zhuo Y, Bhuckory M, Li H, Hattori J, Pham-Howard D, Veysset D, Ling T, Palanker D

Retinal thermal deformations measured with phase-sensitive optical coherence tomography in vivo.
Light Sci Appl. 2025;14(1):151 - PMID: 40175338 - PMCID: PMC11965573 - DOI: 10.1038/s41377-025-01798-x

Manuel LDB, Basu D, Rollins MB, Vincely VD, Keahey P, Villiger M, Bayer CL, South PF, McPeak KM

Au Bipyramids as NIR-II Contrast Agents for In Vivo Plant Imaging.
ACS Appl Mater Interfaces. 2025;17(35):49183-49192 - PMID: 40838762 - PMCID: PMC12412101 - DOI: 10.1021/acsami.5c08908

Truong NTP, Shishkov M, Jahan D, Bouma BE, Suter MJ, Adams DC

Development and characterization of a clinically viable metalens-enhanced optical endoscope.
Opt Express. 2025;33(23):49200-49210 - PMID: 41414318 - DOI: 10.1364/OE.570460

Ruiz-Lopera S, Veysset D, Bouma BE, Uribe-Patarroyo N

Wavenumber-space wavefront sensorless adaptive-optics for optical coherence tomography.
Biomed Opt Express. 2025;17(1):282-293 - PMID: 41532101 - PMCID: PMC12795413 - DOI: 10.1364/BOE.582534

Schmidt G, McAuley R, Bouma BE, Uribe-Patarroyo N

Asynchronous optical coherence elastography and directional phase gradient analysis.
J Biomed Opt. 2025;30(12):124506 - PMID: 40979890 - PMCID: PMC12447186 - DOI: 10.1117/1.JBO.30.12.124506

Lee PY, Chueh CB, Shishkov M, Wang TA, Chen T, Bouma BE, Villiger M

Polarization-Sensitive Module for Optical Coherence Tomography Instruments.
ArXiv. 2025;:ePub - PMID: 41293538 - PMCID: PMC12642765

Masoumi S, Sheft M, Quémener M, Bédard A, Noël VP, Parent M, Villiger M, Côté DC

Catheter-based polarimetric imaging to complement MRI for deep brain stimulation neurosurgery.
Neurophotonics. 2025;12(3):035001 - PMID: 40735541 - PMCID: PMC12301623 - DOI: 10.1117/1.NPh.12.3.035001

Liu CJ, Ammon W, Jones RJ, Nolan JC, Gong D, Maffei C, Blanke N, Edlow BL, Augustinack JC, Magnain C, Yendiki A, Villiger M, Fischl B, Wang H

Three-dimensional fiber orientation mapping of ex vivo human brain at micrometer resolution.
Npj Imaging. 2025;3(1):13 - PMID: 40213097 - PMCID: PMC11978517 - DOI: 10.1038/s44303-025-00074-2

Bak S, Park SM, Song Y, Kim J, Nam TW, Han DW, Kim CS, Cho SW, Bouma BE, Lee H

High spectral energy density all-fiber nanosecond pulsed 1.7 μm light source for photoacoustic microscopy.
Photoacoustics. 2025;44:100744 - PMID: 40606570 - PMCID: PMC12221601 - DOI: 10.1016/j.pacs.2025.100744

Araki M, Park SJ, Dauerman HL, Uemura S, Kim JS, Di Mario C, Johnson TW, Guagliumi G, Kastrati A, Joner M, Holm NR, Alfonso F, Wijns W, Adriaenssens T, Nef H, Rioufol G, Amabile N, Souteyrand G, Meneveau N, Gerbaud E, Opolski MP, Gonzalo N, Tearney GJ, Bouma B, Aguirre AD, Mintz GS, Stone GW, Bourantas CV, Räber L, Gili S, Mizuno K, Kimura S, Shinke T, Hong MK, Jang Y, Cho JM, Yan BP, Porto I, Niccoli G, Montone RA, Thondapu V, Papafaklis MI, Michalis LK, Reynolds H, Saw J, Libby P, Weisz G, Iannaccone M, Gori T, Toutouzas K, Yonetsu T, Minami Y, Takano M, Raffel OC, Kurihara O, Soeda T, Sugiyama T, Kim HO, Lee T, Higuma T, Nakajima A, Yamamoto E, Bryniarski KL, Di Vito L, Vergallo R, Fracassi F, Russo M, Seegers LM, McNulty I, Park S, Feldman M, Escaned J, Prati F, Arbustini E, Pinto FJ, Waksman R, Garcia-Garcia HM, Maehara A, Ali Z, Finn AV, Virmani R, Kini AS, Daemen J, Kume T, Hibi K, Tanaka A, Akasaka T, Kubo T, Yasuda S, Croce K, Granada JF, Lerman A, Prasad A, Regar E, Saito Y, Sankardas MA, Subban V, Weissman NJ, Chen Y, Yu B, Nicholls SJ, Barlis P, West NEJ, Arbab-Zadeh A, Ye JC, Dijkstra J, Lee H, Narula J, Crea F, Nakamura S, Kakuta T, Fujimoto J, Fuster V, Jang IK

Author Correction: Optical coherence tomography in coronary atherosclerosis assessment and intervention.
Nat Rev Cardiol. 2024;21(5):348 - PMID: 38110566 - PMCID: PMC11987009 - DOI: 10.1038/s41569-023-00982-z

Li Y, Wei C, Kooi SE, Veysset D, Guo C, Gan Y, Zhuo Y, Chen G, Naraghi M, Nelson KA, Wu C

Tough Monolayer Silver Nanowire-Reinforced Double-Layer Graphene.
ACS Appl Mater Interfaces. 2024;16(41):55899-55912 - PMID: 39361518 - DOI: 10.1021/acsami.4c04768

Schmidt G, Bouma BE, Uribe-Patarroyo N

Asynchronous, semi-reverberant elastography.
Optica. 2024;11(9):1285-1294 - PMID: 40109673 - PMCID: PMC11922557 - DOI: 10.1364/optica.528507

Salimi M, Tabatabaei N, Villiger M

Artificial neural network for enhancing signal-to-noise ratio and contrast in photothermal optical coherence tomography.
Sci Rep. 2024;14(1):10264 - PMID: 38704427 - PMCID: PMC11069506 - DOI: 10.1038/s41598-024-60682-7

Rao Chintada B, Keahey P, Uribe-Patarroyo N, Bouma BE, Villiger M

Sample tilting for speckle suppression through angular compounding.
Opt Lett. 2024;49(17):4979-4982 - PMID: 39208013 - PMCID: PMC11827440 - DOI: 10.1364/OL.533271

Chintada BR, Ruiz-Lopera S, Restrepo R, Bouma BE, Villiger M, Uribe-Patarroyo N

Probabilistic volumetric speckle suppression in OCT using deep learning.
Biomed Opt Express. 2024;15(8):4453-4469 - PMID: 39346991 - PMCID: PMC11427188 - DOI: 10.1364/BOE.523716

Masoumi S, Lee J, Jones GL, Quémener M, Parent M, Bouma BE, Hariri LP, Côté DC, Villiger M

Absolute depth-resolved optic axis measurement with catheter-based polarization sensitive optical coherence tomography.
Biomed Opt Express. 2024;15(12):6957-6976 - PMID: 39679397 - PMCID: PMC11640563 - DOI: 10.1364/BOE.538560

Mansutti G, Villiger M, Bouma BE, Uribe-Patarroyo N

Full-field amplitude speckle decorrelation angiography.
Biomed Opt Express. 2024;15(10):5756-5772 - PMID: 39421771 - PMCID: PMC11482163 - DOI: 10.1364/BOE.530993

Haft-Javaherian M, Villiger M, Otsuka K, Daemen J, Libby P, Golland P, Bouma BE

Segmentation of anatomical layers and imaging artifacts in intravascular polarization sensitive optical coherence tomography using attending physician and boundary cardinality losses.
Biomed Opt Express. 2024;15(3):1719-1738 - PMID: 38495711 - PMCID: PMC10942710 - DOI: 10.1364/BOE.514673

Jones GL, Albadawi H, Hariri LP, Bouma BE, Oklu R, Villiger M

Aging of deep venous thrombosis in-vivo using polarization sensitive optical coherence tomography.
Biomed Opt Express. 2024;15(6):3627-3638 - PMID: 38867781 - PMCID: PMC11166430 - DOI: 10.1364/BOE.522238

Bec J, Zhou X, Villiger M, Southard JA, Bouma B, Marcu L

Dual modality intravascular catheter system combining pulse-sampling fluorescence lifetime imaging and polarization-sensitive optical coherence tomography.
Biomed Opt Express. 2024;15(4):2114-2132 - PMID: 38633060 - PMCID: PMC11019710 - DOI: 10.1364/BOE.516515

Lee H, Seeger MR, Bouma BE

Electronically Controlled Dual-Wavelength Switchable SRS Fiber Amplifier in the NIR-II Region for Multispectral Photoacoustic Microscopy.
Laser Photon Rev. 2024;18(10):ePub - PMID: 39720420 - PMCID: PMC11666251 - DOI: 10.1002/lpor.202400144

Liu X, Jiang L, Ke M, Sigal IA, Chua J, Hoang QV, Chia AW, Najjar RP, Tan B, Cheong J, Bellemo V, Chong RS, Girard MJA, Ang M, Liu M, Garhöfer G, Barathi VA, Saw SM, Villiger M, Schmetterer L

Posterior scleral birefringence measured by triple-input polarization-sensitive imaging as a biomarker of myopia progression.
Nat Biomed Eng. 2023;7(8):986-1000 - PMID: 37365268 - PMCID: PMC10427432 - DOI: 10.1038/s41551-023-01062-w

Lee SY, Parot VJ, Bouma BE, Villiger M

Efficient dispersion modeling in optical multimode fiber.
Light Sci Appl. 2023;12(1):31 - PMID: 36720851 - PMCID: PMC9889807 - DOI: 10.1038/s41377-022-01061-7

Ruiz-Lopera S, Restrepo R, Cannon TM, Villiger M, Bouma BE, Uribe-Patarroyo N

Computational refocusing in phase-unstable polarization-sensitive optical coherence tomography.
Opt Lett. 2023;48(18):4765-4768 - PMID: 37707897 - PMCID: PMC10871002 - DOI: 10.1364/OL.499051

Leitgeb RA, Bouma B, Grieve K, Hendon C, Podoleanu A, Wojtkowski M, Yasuno Y

30 Years of Optical Coherence Tomography: introduction to the feature issue.
Biomed Opt Express. 2023;14(10):5484-5487 - PMID: 37854547 - PMCID: PMC10581797 - DOI: 10.1364/BOE.505569

Jones GL, Xiong Q, Liu X, Bouma BE, Villiger M

Single-input polarization-sensitive optical coherence tomography through a catheter.
Biomed Opt Express. 2023;14(9):4609-4626 - PMID: 37791262 - PMCID: PMC10545192 - DOI: 10.1364/BOE.497123

Cannon TM, Bouma BE, Uribe-Patarroyo N

Mapping optical scattering properties to physical particle information in singly and multiply scattering samples.
Biomed Opt Express. 2023;14(8):4326-4348 - PMID: 37799686 - PMCID: PMC10549752 - DOI: 10.1364/BOE.494518

Chintada BR, Ruiz-Lopera S, Restrepo R, Bouma BE, Villiger M, Uribe-Patarroyo N

Probabilistic volumetric speckle suppression in OCT using deep learning.
ArXiv. 2023;:ePub - PMID: 38106457 - PMCID: PMC10723542

Araki M, Park SJ, Dauerman HL, Uemura S, Kim JS, Di Mario C, Johnson TW, Guagliumi G, Kastrati A, Joner M, Holm NR, Alfonso F, Wijns W, Adriaenssens T, Nef H, Rioufol G, Amabile N, Souteyrand G, Meneveau N, Gerbaud E, Opolski MP, Gonzalo N, Tearney GJ, Bouma B, Aguirre AD, Mintz GS, Stone GW, Bourantas CV, Räber L, Gili S, Mizuno K, Kimura S, Shinke T, Hong MK, Jang Y, Cho JM, Yan BP, Porto I, Niccoli G, Montone RA, Thondapu V, Papafaklis MI, Michalis LK, Reynolds H, Saw J, Libby P, Weisz G, Iannaccone M, Gori T, Toutouzas K, Yonetsu T, Minami Y, Takano M, Raffel OC, Kurihara O, Soeda T, Sugiyama T, Kim HO, Lee T, Higuma T, Nakajima A, Yamamoto E, Bryniarski KL, Di Vito L, Vergallo R, Fracassi F, Russo M, Seegers LM, McNulty I, Park S, Feldman M, Escaned J, Prati F, Arbustini E, Pinto FJ, Waksman R, Garcia-Garcia HM, Maehara A, Ali Z, Finn AV, Virmani R, Kini AS, Daemen J, Kume T, Hibi K, Tanaka A, Akasaka T, Kubo T, Yasuda S, Croce K, Granada JF, Lerman A, Prasad A, Regar E, Saito Y, Sankardas MA, Subban V, Weissman NJ, Chen Y, Yu B, Nicholls SJ, Barlis P, West NEJ, Arbab-Zadeh A, Ye JC, Dijkstra J, Lee H, Narula J, Crea F, Nakamura S, Kakuta T, Fujimoto J, Fuster V, Jang IK

Optical coherence tomography in coronary atherosclerosis assessment and intervention.
Nat Rev Cardiol. 2022;19(10):684-703 - PMID: 35449407 - PMCID: PMC9982688 - DOI: 10.1038/s41569-022-00687-9

Lee SY, Parot VJ, Bouma BE, Villiger M

Confocal 3D reflectance imaging through multimode fiber without wavefront shaping.
Optica. 2022;9(1):112-120 - PMID: 35419464 - PMCID: PMC9005109 - DOI: 10.1364/OPTICA.446178

Cannon TM, Uribe-Patarroyo N, Villiger M, Bouma BE

Measuring collagen injury depth for burn severity determination using polarization sensitive optical coherence tomography.
Sci Rep. 2022;12(1):10479 - PMID: 35729262 - PMCID: PMC9213509 - DOI: 10.1038/s41598-022-14326-3

Pahlevaninezhad M, Huang YW, Pahlevani M, Bouma B, Suter MJ, Capasso F, Pahlevaninezhad H

Metasurface-based bijective illumination collection imaging provides high-resolution tomography in three dimensions.
Nat Photonics. 2022;16(3):203-211 - PMID: 35937091 - PMCID: PMC9355264 - DOI: 10.1038/s41566-022-00956-6

Nandy S, Berigei SR, Keyes CM, Muniappan A, Auchincloss HG, Lanuti M, Roop BW, Shih AR, Colby TV, Medoff BD, Suter MJ, Villiger M, Hariri LP

Polarization-Sensitive Endobronchial Optical Coherence Tomography for Microscopic Imaging of Fibrosis in Interstitial Lung Disease.
Am J Respir Crit Care Med. 2022;206(7):905-910 - PMID: 35675552 - PMCID: PMC12042782 - DOI: 10.1164/rccm.202112-2832LE

Lee H, Seeger MR, Lippok N, Nadkarni SK, van Soest G, Bouma BE

Nanosecond SRS fiber amplifier for label-free near-infrared photoacoustic microscopy of lipids.
Photoacoustics. 2022;25:100331 - PMID: 35096525 - PMCID: PMC8783138 - DOI: 10.1016/j.pacs.2022.100331

DePaoli D, Côté DC, Bouma BE, Villiger M

Endoscopic imaging of white matter fiber tracts using polarization-sensitive optical coherence tomography.
Neuroimage. 2022;264:119755 - PMID: 36400379 - PMCID: PMC9802682 - DOI: 10.1016/j.neuroimage.2022.119755

Keahey P, Si P, Razavi M, Yu S, Lippok N, Villiger M, Padera TP, de la Zerda A, Bouma B

Spectral- and Polarization-Dependent Scattering of Gold Nanobipyramids for Exogenous Contrast in Optical Coherence Tomography.
Nano Lett. 2021;21(20):8595-8601 - PMID: 34644094 - PMCID: PMC8555503 - DOI: 10.1021/acs.nanolett.1c02291

Salimi MH, Villiger M, Tabatabaei N

Transient-mode photothermal optical coherence tomography.
Opt Lett. 2021;46(22):5703-5706 - PMID: 34780441 - PMCID: PMC10801791 - DOI: 10.1364/OL.443987

Nandy S, Helland TL, Roop BW, Raphaely RA, Ly A, Lew M, Berigei SR, Villiger M, Sorokina A, Szabari MV, Fintelmann FJ, Suter MJ, Hariri LP

Rapid non-destructive volumetric tumor yield assessment in fresh lung core needle biopsies using polarization sensitive optical coherence tomography.
Biomed Opt Express. 2021;12(9):5597-5613 - PMID: 34692203 - PMCID: PMC8515979 - DOI: 10.1364/BOE.433346

Cannon TM, Bouma BE, Uribe-Patarroyo N

Layer-based, depth-resolved computation of attenuation coefficients and backscattering fractions in tissue using optical coherence tomography.
Biomed Opt Express. 2021;12(8):5037-5056 - PMID: 34513241 - PMCID: PMC8407832 - DOI: 10.1364/BOE.427833

van Zandvoort LJC, Otsuka K, Villiger M, Neleman T, Dijkstra J, Zijlstra F, van Mieghem NM, Bouma BE, Daemen J

Polarimetric Signatures of Coronary Thrombus in Patients With Acute Coronary Syndrome.
Circ J. 2021;85(10):1806-1813 - PMID: 33828020 - PMCID: PMC10782573 - DOI: 10.1253/circj.CJ-20-0862

Van Zandvoort LJC, Otsuka K, Bouma BE, Daemen J

Intracoronary polarimetry of a honeycomb-like structure.
EuroIntervention. 2021;16(17):1422-1423 - PMID: 31403462 - PMCID: PMC7238317 - DOI: 10.4244/EIJ-D-19-00431

Ren J, Shishkov M, Villiger ML, Otsuka K, Nadkarni SK, Bouma BE

Single-catheter dual-modality intravascular imaging combining IVUS and OFDI: a holistic structural visualisation of coronary arteries.
EuroIntervention. 2021;17(11):e919-e922 - PMID: 34219665 - PMCID: PMC8649034 - DOI: 10.4244/EIJ-D-20-00990

Ren J, Bouma BE

Whole Murine Brain Imaging Based on Optical Elastic Scattering.
Adv Exp Med Biol. 2021;3233:109-125 - PMID: 34053025 - DOI: 10.1007/978-981-15-7627-0_6

Otsuka K, Villiger M, van Zandvoort LJC, Neleman T, Karanasos A, Dijkstra J, van Soest G, Regar E, Nadkarni SK, Daemen J, Bouma BE

Polarimetric Signatures of Vascular Tissue Response to Drug-Eluting Stent Implantation in Patients.
JACC Cardiovasc Imaging. 2020;13(12):2695-2696 - PMID: 32828773 - PMCID: PMC7736522 - DOI: 10.1016/j.jcmg.2020.07.009

Lee SY, Hui PC, Bouma B, Villiger M

Single-shot depth profiling by spatio-temporal encoding with a multimode fiber.
Opt Express. 2020;28(2):1124-1138 - PMID: 32121828 - PMCID: PMC7053500 - DOI: 10.1364/OE.383145

Ruiz-Lopera S, Restrepo R, Cuartas-Velez C, Bouma BE, Uribe-Patarroyo N

Computational adaptive optics in phase-unstable optical coherence tomography.
Opt Lett. 2020;45(21):5982-5985 - PMID: 33137049 - PMCID: PMC8384075 - DOI: 10.1364/OL.401283

Lee H, Kim GH, Villiger M, Jang H, Bouma BE, Kim CS

Linear-in-wavenumber actively-mode-locked wavelength-swept laser.
Opt Lett. 2020;45(19):5327-5330 - PMID: 33001885 - PMCID: PMC7574329 - DOI: 10.1364/OL.397715

Keahey PA, Bouma BE, Villiger M

Automated noise estimation in polarization-sensitive optical coherence tomography.
Opt Lett. 2020;45(10):2748-2751 - PMID: 32412457 - PMCID: PMC7506521 - DOI: 10.1364/OL.390334

Maltais-Tariant R, Boudoux C, Uribe-Patarroyo N

Real-time co-localized OCT surveillance of laser therapy using motion corrected speckle decorrelation.
Biomed Opt Express. 2020;11(6):2925-2950 - PMID: 32637233 - PMCID: PMC7316020 - DOI: 10.1364/BOE.385654

Li Q, Karnowski K, Untracht G, Noble PB, Cense B, Villiger M, Sampson DD

Vectorial birefringence imaging by optical coherence microscopy for assessing fibrillar microstructures in the cornea and limbus.
Biomed Opt Express. 2020;11(2):1122-1138 - PMID: 32206403 - PMCID: PMC7041478 - DOI: 10.1364/BOE.382755

Park EA, Tsikata E, Lee JJ, Shieh E, Braaf B, Vakoc BJ, Bouma BE, de Boer JF, Chen TC

Artifact Rates for 2D Retinal Nerve Fiber Layer Thickness Versus 3D Neuroretinal Rim Thickness Using Spectral-Domain Optical Coherence Tomography.
Transl Vis Sci Technol. 2020;9(10):10 - PMID: 32974082 - PMCID: PMC7488619 - DOI: 10.1167/tvst.9.10.10

Lee SY, Parot VJ, Bouma BE, Villiger M

Reciprocity-induced symmetry in the round-trip transmission through complex systems.
APL Photonics. 2020;5(10):ePub - PMID: 33088915 - PMCID: PMC7575207 - DOI: 10.1063/5.0021285

Beretta-Piccoli M, Cescon C, Barbero M, Villiger M, Clijsen R, Kool J, Kesselring J, Bansi J

Upper and lower limb performance fatigability in people with multiple sclerosis investigated through surface electromyography: a pilot study.
Physiol Meas. 2020;41(2):025002 - PMID: 31972554 - DOI: 10.1088/1361-6579/ab6f54

Struyvenberg M, Kahn A, Fleischer D, Swager AF, Bouma B, Ganguly EK, Konda V, Lightdale CJ, Pleskow D, Sethi A, Smith M, Trindade AJ, Wallace MB, Wang K, Wolfsen HC, Tearney GJ, Curvers WL, Leggett CL, Bergman JJ

Expert assessment on volumetric laser endomicroscopy full scans in Barrett's esophagus patients with or without high grade dysplasia or early cancer.
Endoscopy. 2020;53(3):218-225 - PMID: 32515006 - DOI: 10.1055/a-1194-0397

Snyder PJ, Alber J, Alt C, Bain LJ, Bouma BE, Bouwman FH, DeBuc DC, Campbell MCW, Carrillo MC, Chew EY, Cordeiro MF, Dueñas MR, Fernández BM, Koronyo-Hamaoui M, La Morgia C, Carare RO, Sadda SR, van Wijngaarden P, Snyder HM

Retinal imaging in Alzheimer's and neurodegenerative diseases.
Alzheimers Dement. 2020;17(1):103-111 - PMID: 33090722 - PMCID: PMC8062064 - DOI: 10.1002/alz.12179

Otsuka K, Villiger M, Karanasos A, van Zandvoort LJC, Doradla P, Ren J, Lippok N, Daemen J, Diletti R, van Geuns RJ, Zijlstra F, van Soest G, Dijkstra J, Nadkarni SK, Regar E, Bouma BE

Intravascular Polarimetry in Patients With Coronary Artery Disease.
JACC Cardiovasc Imaging. 2019;13(3):790-801 - PMID: 31422135 - PMCID: PMC7241775 - DOI: 10.1016/j.jcmg.2019.06.015

Doradla P, Otsuka K, Nadkarni A, Villiger M, Karanasos A, Zandvoort LJCV, Dijkstra J, Zijlstra F, Soest GV, Daemen J, Regar E, Bouma BE, Nadkarni SK

Biomechanical Stress Profiling of Coronary Atherosclerosis: Identifying a Multifactorial Metric to Evaluate Plaque Rupture Risk.
JACC Cardiovasc Imaging. 2019;13(3):804-816 - PMID: 31005542 - PMCID: PMC9919872 - DOI: 10.1016/j.jcmg.2019.01.033

López-Marín A, Springeling G, Beurskens R, van Beusekom H, van der Steen AFW, Koch AD, Bouma BE, Huber R, van Soest G, Wang T

Motorized capsule for shadow-free OCT imaging and synchronous beam control.
Opt Lett. 2019;44(15):3641-3644 - PMID: 31368932 - DOI: 10.1364/OL.44.003641

Xiong Q, Wang N, Liu X, Chen S, Braganza CS, Bouma BE, Liu L, Villiger M

Constrained polarization evolution simplifies depth-resolved retardation measurements with polarization-sensitive optical coherence tomography.
Biomed Opt Express. 2019;10(10):5207-5222 - PMID: 31646042 - PMCID: PMC6788597 - DOI: 10.1364/BOE.10.005207

Lo WCY, Uribe-Patarroyo N, Hoebel K, Beaudette K, Villiger M, Nishioka NS, Vakoc BJ, Bouma BE

Balloon catheter-based radiofrequency ablation monitoring in porcine esophagus using optical coherence tomography.
Biomed Opt Express. 2019;10(4):2067-2089 - PMID: 31086717 - PMCID: PMC6484999 - DOI: 10.1364/BOE.10.002067

Liu Y, Jassim F, Braaf B, Khoueir Z, Poon LY, Ben-David GS, Papadogeorgou G, Tsikata E, Simavli H, Que C, Lee R, Shieh E, Vakoc BJ, Bouma BE, de Boer JF, Chen TC

Diagnostic Capability of 3D Peripapillary Retinal Volume for Glaucoma Using Optical Coherence Tomography Customized Software.
J Glaucoma. 2019;28(8):708-717 - PMID: 31180936 - PMCID: PMC6727946 - DOI: 10.1097/IJG.0000000000001291

Khoueir Z, Jassim F, Braaf B, Poon LY, Tsikata E, Chodosh J, Dohlman CH, Vakoc BJ, Bouma BE, de Boer JF, Chen TC

Three-Dimensional Optical Coherence Tomography Imaging For Glaucoma Associated With Boston Keratoprosthesis Type I and II.
J Glaucoma. 2019;28(8):718-726 - PMID: 31169563 - PMCID: PMC6727947 - DOI: 10.1097/IJG.0000000000001280

Hariri LP, Adams DC, Applegate MB, Miller AJ, Roop BW, Villiger M, Bouma BE, Suter MJ

Distinguishing Tumor from Associated Fibrosis to Increase Diagnostic Biopsy Yield with Polarization-Sensitive Optical Coherence Tomography.
Clin Cancer Res. 2019;25(17):5242-5249 - PMID: 31175092 - PMCID: PMC6726561 - DOI: 10.1158/1078-0432.CCR-19-0566

Deliyski DD, Shishkov M, Mehta DD, Ghasemzadeh H, Bouma B, Zañartu M, de Alarcon A, Hillman RE

Laser-Calibrated System for Transnasal Fiberoptic Laryngeal High-Speed Videoendoscopy.
J Voice. 2019;35(1):122-128 - PMID: 31383516 - PMCID: PMC6995434 - DOI: 10.1016/j.jvoice.2019.07.013

Lippok N, Braaf B, Villiger M, Oh WY, Vakoc BJ, Bouma BE

Quantitative depolarization measurements for fiber-based polarization-sensitive optical frequency domain imaging of the retinal pigment epithelium.
J Biophotonics. 2018;12(1):e201800156 - PMID: 30009506 - PMCID: PMC6526942 - DOI: 10.1002/jbio.201800156

Nam AS, Ren J, Bouma BE, Vakoc BJ

Demonstration of Triband Multi-Focal Imaging with Optical Coherence Tomography.
Appl Sci (Basel). 2018;8(12):ePub - PMID: 31308961 - PMCID: PMC6628925 - DOI: 10.3390/app8122395

Villiger M, Otsuka K, Karanasos A, Doradla P, Ren J, Lippok N, Shishkov M, Daemen J, Diletti R, van Geuns RJ, Zijlstra F, van Soest G, Libby P, Regar E, Nadkarni SK, Bouma BE

Coronary Plaque Microstructure and Composition Modify Optical Polarization: A New Endogenous Contrast Mechanism for Optical Frequency Domain Imaging.
JACC Cardiovasc Imaging. 2017;11(11):1666-1676 - PMID: 29248662 - PMCID: PMC5994172 - DOI: 10.1016/j.jcmg.2017.09.023

Ren J, Choi H, Chung K, Bouma BE

Label-free volumetric optical imaging of intact murine brains.
Sci Rep. 2017;7:46306 - PMID: 28401897 - PMCID: PMC5388920 - DOI: 10.1038/srep46306

Kravez E, Villiger M, Bouma B, Yarmush M, Yakhini Z, Golberg A

Prediction of Scar Size in Rats Six Months after Burns Based on Early Post-injury Polarization-Sensitive Optical Frequency Domain Imaging.
Front Physiol. 2017;8:967 - PMID: 29249978 - PMCID: PMC5717021 - DOI: 10.3389/fphys.2017.00967

Kassani SH, Villiger M, Uribe-Patarroyo N, Jun C, Khazaeinezhad R, Lippok N, Bouma BE

Extended bandwidth wavelength swept laser source for high resolution optical frequency domain imaging.
Opt Express. 2017;25(7):8255-8266 - PMID: 28380940 - PMCID: PMC5810910 - DOI: 10.1364/OE.25.008255

Liu X, Beaudette K, Wang X, Liu L, Bouma BE, Villiger M

Tissue-like phantoms for quantitative birefringence imaging.
Biomed Opt Express. 2017;8(10):4454-4465 - PMID: 29082077 - PMCID: PMC5654792 - DOI: 10.1364/BOE.8.004454

Izatt JA, Boppart S, Bouma B, de Boer J, Drexler W, Li X, Yasuno Y

Introduction to the feature issue on the 25 year anniversary of optical coherence tomography.
Biomed Opt Express. 2017;8(7):3289-3291 - PMID: 28717567 - PMCID: PMC5508828 - DOI: 10.1364/BOE.8.003289

Bouma BE, Villiger M, Otsuka K, Oh WY

Intravascular optical coherence tomography [Invited].
Biomed Opt Express. 2017;8(5):2660-2686 - PMID: 28663897 - PMCID: PMC5480504 - DOI: 10.1364/BOE.8.002660

Golberg A, Villiger M, Felix Broelsch G, Quinn KP, Albadawi H, Khan S, Watkins MT, Georgakoudi I, Austen WG, Bei M, Bouma BE, Mihm MC, Yarmush ML

Skin regeneration with all accessory organs following ablation with irreversible electroporation.
J Tissue Eng Regen Med. 2017;12(1):98-113 - PMID: 27976527 - PMCID: PMC5555830 - DOI: 10.1002/term.2374

Lippok N, Villiger M, Albanese A, Meijer EFJ, Chung K, Padera TP, Bhatia SN, Bouma BE

Depolarization signatures map gold nanorods within biological tissue.
Nat Photonics. 2017;11:583-588 - PMID: 29201136 - PMCID: PMC5703429 - DOI: 10.1038/nphoton.2017.128

Khoueir Z, Jassim F, Poon LY, Tsikata E, Ben-David GS, Liu Y, Shieh E, Lee R, Guo R, Papadogeorgou G, Braaf B, Simavli H, Que C, Vakoc BJ, Bouma BE, de Boer JF, Chen TC

Diagnostic Capability of Peripapillary Three-dimensional Retinal Nerve Fiber Layer Volume for Glaucoma Using Optical Coherence Tomography Volume Scans.
Am J Ophthalmol. 2017;182:180-193 - PMID: 28807732 - PMCID: PMC5610646 - DOI: 10.1016/j.ajo.2017.08.001

van der Sijde JN, Karanasos A, Villiger M, Bouma BE, Regar E

First-in-man assessment of plaque rupture by polarization-sensitive optical frequency domain imaging in vivo.
Eur Heart J. 2016;37(24):1932 - PMID: 27174288 - PMCID: PMC4917748 - DOI: 10.1093/eurheartj/ehw179

Adams DC, Hariri LP, Miller AJ, Wang Y, Cho JL, Villiger M, Holz JA, Szabari MV, Hamilos DL, Scott Harris R, Griffith JW, Bouma BE, Luster AD, Medoff BD, Suter MJ

Birefringence microscopy platform for assessing airway smooth muscle structure and function in vivo.
Sci Transl Med. 2016;8(359):359ra131 - PMID: 27708064 - PMCID: PMC5389120 - DOI: 10.1126/scitranslmed.aag1424

Jang SJ, Park HS, Song JW, Kim TS, Cho HS, Kim S, Bouma BE, Kim JW, Oh WY

ECG-Triggered, Single Cardiac Cycle, High-Speed, 3D, Intracoronary OCT.
JACC Cardiovasc Imaging. 2016;9(5):623-5 - PMID: 27151525 - PMCID: PMC5523103 - DOI: 10.1016/j.jcmg.2015.11.021

Villiger M, Lorenser D, McLaughlin RA, Quirk BC, Kirk RW, Bouma BE, Sampson DD

Deep tissue volume imaging of birefringence through fibre-optic needle probes for the delineation of breast tumour.
Sci Rep. 2016;6:28771 - PMID: 27364229 - PMCID: PMC4929466 - DOI: 10.1038/srep28771

Blatter C, Meijer EF, Nam AS, Jones D, Bouma BE, Padera TP, Vakoc BJ

In vivo label-free measurement of lymph flow velocity and volumetric flow rates using Doppler optical coherence tomography.
Sci Rep. 2016;6:29035 - PMID: 27377852 - PMCID: PMC4932526 - DOI: 10.1038/srep29035

Rico-Jimenez JJ, Campos-Delgado DU, Villiger M, Otsuka K, Bouma BE, Jo JA

Automatic classification of atherosclerotic plaques imaged with intravascular OCT.
Biomed Opt Express. 2016;7(10):4069-4085 - PMID: 27867716 - PMCID: PMC5102521 - DOI: 10.1364/BOE.7.004069

Kim TS, Park HS, Jang SJ, Song JW, Cho HS, Kim S, Bouma BE, Kim JW, Oh WY

Single cardiac cycle three-dimensional intracoronary optical coherence tomography.
Biomed Opt Express. 2016;7(12):4847-4858 - PMID: 28018710 - PMCID: PMC5175536 - DOI: 10.1364/BOE.7.004847

Lo WC, Uribe-Patarroyo N, Nam AS, Villiger M, Vakoc BJ, Bouma BE

Laser thermal therapy monitoring using complex differential variance in optical coherence tomography.
J Biophotonics. 2016;10(1):84-91 - PMID: 27623742 - PMCID: PMC5243231 - DOI: 10.1002/jbio.201600072

Uribe-Patarroyo N, Bouma BE

Velocity gradients in spatially resolved laser Doppler flowmetry and dynamic light scattering with confocal and coherence gating.
Phys Rev E. 2016;94(2-1):022604 - PMID: 27627357 - PMCID: PMC5059111 - DOI: 10.1103/PhysRevE.94.022604

Lo WCY, Villiger M, Golberg A, Broelsch GF, Khan S, Lian CG, Austen WG, Yarmush M, Bouma BE

Longitudinal, 3D Imaging of Collagen Remodeling in Murine Hypertrophic Scars In Vivo Using Polarization-Sensitive Optical Frequency Domain Imaging.
J Invest Dermatol. 2016;136(1):84-92 - PMID: 26763427 - PMCID: PMC4809366 - DOI: 10.1038/JID.2015.399

Golberg A, Villiger M, Khan S, Quinn KP, Lo WCY, Bouma BE, Mihm MC, Austen WG, Yarmush ML

Preventing Scars after Injury with Partial Irreversible Electroporation.
J Invest Dermatol. 2016;136(11):2297-2304 - PMID: 27393126 - PMCID: PMC5516938 - DOI: 10.1016/j.jid.2016.06.620

Gerbaud E, Weisz G, Tanaka A, Kashiwagi M, Shimizu T, Wang L, Souza C, Bouma BE, Suter MJ, Shishkov M, Ughi GJ, Halpern EF, Rosenberg M, Waxman S, Moses JW, Mintz GS, Maehara A, Tearney GJ

Multi-laboratory inter-institute reproducibility study of IVOCT and IVUS assessments using published consensus document definitions.
Eur Heart J Cardiovasc Imaging. 2015;17(7):756-64 - PMID: 26377904 - PMCID: PMC4907381 - DOI: 10.1093/ehjci/jev229
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